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Solanum lycopersicum strain:Rio Grande prf3

ABSTRACT: Solanum lycopersicum strain:Rio Grande prf3 Transcriptome or Gene expression

PROVIDER: PRJNA214335 | ENA |

REPOSITORIES: ENA

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Dataset's files

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			Action	DRS
	SRR948460.fastq.gz	Fastqsanger.gz
	SRR948461.fastq.gz	Fastqsanger.gz
	SRR948462.fastq.gz	Fastqsanger.gz
	SRR948463.fastq.gz	Fastqsanger.gz
	SRR948464.fastq.gz	Fastqsanger.gz

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Project description:To characterize the PTI response of tomato and the effect of the delivery of a subset of effectors, we performed an RNA-seq analysis of tomato Rio Grande prf3 leaves challenged with either the flgII-28 peptide or the following bacterial strains: Agrobacterium tumefaciens GV2260, Pseudomonas fluorescens 55, Pseudomonas putida KT2440, Pseudomonas syringae pv. tomato (Pst) DC3000, Pst DC3000 deltahrcQ-U deltafliC and Pst DC3000 deltaavrPto deltaavrPtoB. NOTE: Samples in SRA were assigned the same sample accession. This is incorrect as there are different samples, hence âSource Nameâ was replaced with new values. Comment[ENA_SAMPLE] contains the original SRA sample accessions.

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Next Generation Sequencing Facilitates Quantitative Analysis of Solanum lycopersicum Flower Transcriptomes

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