Popillia japonica strain:Newman
Ontology highlight
ABSTRACT:
PROVIDER: PRJNA233626 | ENA |
REPOSITORIES: ENA
Dataset's files
| Action | DRS | |||
|---|---|---|---|---|
| SRR1099718.fastq.gz | Fastqsanger.gz |
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Project description:Popillia japonica Antenna Transcriptome
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Project description:Japanese beetle (Popillia japonica) genome sequencing and assembly
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Project description:Invasive species alter ecosystems, threaten native and endangered species, and have negative economic impacts. Knowing where invading individuals are from and when they arrive to a new site can guide management. Here, we evaluated how well the stable hydrogen isotope composition (?2H) records the recent origin and time since arrival of specimens of the invasive Japanese beetle (Popillia japonica Newman) captured near the Portland International Airport (Oregon, U.S.A.). The ?2H of Japanese beetle specimens collected from sites across the contiguous U.S.A. reflected the ?2H of local precipitation, a relationship similar to that documented for other organisms, and one confirming the utility of ?2H as a geographic fingerprint. Within weeks after experimental relocation to a new isotopic environment, the ?2H of beetles changed linearly with time, demonstrating the potential for ?2H to also mark the timing of arrival to a new location. We used a hierarchical Bayesian model to estimate the recent geographical origin and timing of arrival of each specimen based on its ?2H value. The geographic resolution was broad, with values consistent with multiple regions of origin in the eastern U.S.A., slightly favoring the southeastern U.S.A. as the more likely source. Beetles trapped from 2007-2010 had arrived 30 or more days prior to trapping, whereas the median time since arrival declined to 3-7 days for beetles trapped from 2012-2014. This reduction in the time between arrival and trapping at the Portland International Airport supports the efficacy of trapping and spraying to prevent establishment. More generally, our analysis shows how stable isotopes can serve as sentinels of biological invasions, verifying the efficacy of control measures, or, alternatively, indicating when those measures show signs of failure.
| S-EPMC4784742 | biostudies-literature
Project description:The Panel on Plant Health performed a pest categorisation of Popillia japonica (Coleoptera: Scarabaeidae) for the EU. P. japonica is a distinguishable species listed in Annex IAII of Council Directive 2000/29/EC. It is native to Japan but established in the USA in the early 20th century. It spreads from New Jersey to most US states east of the Mississippi, some to the west and north into Canada. P. japonica feeds on over 700 plant species. Adults attack foliage and fruit surfaces. They can cause serious injury to tree fruits and soft fruit, vegetable crops, ornamental herbaceous plants, shrubs, vines and trees. Larvae are root feeders regarded as serious pests of lawns and turf, vegetables and nursery stock. Adults emerge during the summer and can fly short distances on warm sunny days. The life cycle is usually completed in one year. In cooler regions, development takes two years. P. japonica occurs in the EU in the Azores (Portugal), Lombardy and Piedmont (Italy) where it is under official control. Adults are suspected of being able to spread on aircraft as hitchhikers, i.e. without host plants. Soil accompanying plants for planting provides a pathway for further introductions. Hosts are widely available within the EU. Climatic conditions across central and parts of southern EU are suitable for development in one year. Across parts of northern Europe development over two years is likely. Without control, impacts could be expected on a range of plants. Phytosanitary measures are available to reduce the likelihood of introduction of P. japonica. All criteria assessed by EFSA for consideration as a potential Union quarantine pest are met. Plants for planting are not necessarily the main means of spread so P. japonica does not satisfy all criteria necessary for it to be regarded as a Union regulated non-quarantine pest (RNQP).
| S-EPMC7009705 | biostudies-literature
Project description:To reveal transcriptome dynamics during adventitious root formation in a coniferous tree, C. japonica, we conducted custom microarry experiments. Three parts from cuttings of easy-to-root clone of C. japonica were collected at eight time points during adventitious root formation. The results revealed major turning points on transcriptome toward adventitious root formation and the expression behavior of genes related to carbohydrate, plant hormone and others suggested the important biological changes for adventitious root formation.
2018-12-25 | GSE102874 | GEO