Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Drosophila melanogaster

ABSTRACT: mRNA profiling of Drosophila midguts treated by uracil

PROVIDER: PRJNA248459 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR1297373_1.fastq.gz	Fastqsanger.gz
	SRR1297373_2.fastq.gz	Fastqsanger.gz
	SRR1297374_1.fastq.gz	Fastqsanger.gz
	SRR1297374_2.fastq.gz	Fastqsanger.gz
	SRR1297375_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 8

Similar Datasets

Drosophila melanogaster

Project description:mRNA profiling of JHDM2 knockdown Drosophila midguts post-infection with Ecc15

| PRJNA232941 | ENA

mRNA profiling of Drosophila midguts treated by uracil

Project description:We performed an mRNA-sequencing experiment using Drosophila midgut to find uracil-induced signaling pathways and biological processes in response to uracil. The sequenced reads from Illumina Hiseq2000 that passed quality filters were mapped to Drosophila genome (NCBI build 5.3) using Tophat and then quantitatively analyzed by HTseq at the gene level. By comparing uracil-treated and non-treated samplesl, we profiled uracil-dependent gene expression changes.

2014-12-31 | GSE57941 | GEO

Drosophila melanogaster

Project description:Whole genome expression data from female adult Drosophila melanogaster midguts

| PRJNA387176 | ENA

Drosophila melanogaster

Project description:Drosophila brain gene expression with age: mRNA profiling

| PRJNA142723 | ENA

Drosophila melanogaster

Project description:Influences of Bwoman-Birk Inhibitor on genomics in Drosophila melanogaster larval midguts

| PRJNA107029 | ENA

Whole genome expression data from female adult Drosophila melanogaster midguts

Project description:The highly conserved Wnt signaling pathway drives intestinal homeostasis across species. Apc is a negative regulator of Wnt signaling. Loss of function mutations in Apc are found in 80-90% of human colorectal cancers. Importantly, Apc loss is widely known as the key driving event in the disease. We used microarray analysis of adult Drosophila midguts to study the molecular mechanisms regulated upon loss of Apc in the intestine.

2017-05-19 | GSE99071 | GEO

Drosophila melanogaster

Project description:mRNA-seq of Drosophila Ago2 mutants

| PRJNA221257 | ENA

Drosophila melanogaster

Project description:mRNA-seq in Drosophila larval fat body

| PRJNA356324 | ENA

Analysis of gene expression regulated by Drosophila melanogaster Tis11

Project description:In mammalian cells, AU-rich elements (AREs) are well known regulatory sequences located in the 3' untranslated region (UTR) of many short-lived mRNAs that suppress gene expression at the posttranscriptional level. Tis11, a zinc finger RNA-binding protein homologous to mammalian tristetraprolin, targets ARE-containing reporter mRNAs for rapid degradation in SL2 cells. To identify Drosophila mRNA targets of Tis11, we performed genome-wide expression profiling after dsRNA-mediated depletion of endogenous Tis11 in SL2 cells. Furthermore, we studied the involvement of Tis11 in regulating the Drosophila immune response by profiling mRNA expression after LPS treatment, in the presence or absence of Tis11. SL2 cells were treated with either dsRNA against Tis11 or dsRNA against GFP (control). After 4 days of treatment with 12.5 microgram dsRNA / ml medium, total RNA was extracted and hybridized to Drosophila Genome 2.0 Arrays (Affymetrix, Cat. No. 900531). Where indicated, cells were treated with lipopolysaccharide (LPS, Sigma, O55:B5) at a concentration of 10 microgram / ml for 4 hours before lysis. All experiments were performed in 3 biological replicates.

2011-03-24 | E-GEOD-28147 | biostudies-arrayexpress

Analysis of gene expression regulated by Drosophila melanogaster Tis11

2011-03-25 | GSE28147 | GEO