Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Bifidobacterium bifidum strain:MJR8628B

ABSTRACT: HMP reference genome

PROVIDER: PRJNA272088 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	LRPO01.dat.gz	Other
	LRPO01.fasta.gz	Fasta.gz
	LRPO01.master.dat	Other
	SRR2088901_1.fastq.gz	Fastqsanger.gz
	SRR2088901_2.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 6

Similar Datasets

Bifidobacterium bifidum strain:MJR8628B

Project description:HMP reference genome

| PRJNA272088 | ENA

Bifidobacterium bifidum VIII-210

Project description:HMP reference genome

| PRJNA227982 | ENA

Bifidobacterium longum strain:CMW7750

Project description:HMP reference genome

| PRJNA272123 | ENA

Bifidobacterium breve strain:GED8481

Project description:HMP reference genome

| PRJNA272085 | ENA

Complete genome sequence of the probiotic bacterium Bifidobacterium bifidum strain BGN4.

Project description:Bifidobacterium bifidum, a common endosymbiotic inhabitant of the human gut, is considered a prominent probiotic microorganism that may promote health. We completely decrypted the 2.2-Mb genome sequence of B. bifidum BGN4, a strain that had been isolated from the fecal sample of a healthy breast-fed infant, and annotated 1,835 coding sequences.

| S-EPMC3415514 | biostudies-literature

Bifidobacterium adolescentis XVI122

Project description:HMP reference genome

| PRJNA227986 | ENA

Bifidobacterium breve HPH0326

Project description:HMP reference genome

| PRJNA169434 | ENA

The Infant-Derived Bifidobacterium bifidum Strain CNCM I-4319 Strengthens Gut Functionality.

Project description:Bifidobacteria are among the first colonisers of the gastrointestinal tract of breast-fed newborns due to, among other things, their ability to metabolise oligosaccharides naturally occurring in human milk. The presence of bifidobacteria in the infant gut has been shown to promote intestinal health and homeostasis as well as to preserve a functional gut barrier, thus positively influencing host health and well-being. Among human-associated gut commensals, Bifidobacterium bifidum has been described as the only species capable of the extracellular degradation of both mucin-type glycans and HMOs, thereby giving this species a special role as a commensal gut forager of both host and diet-derived glycans. In the present study, we assess the possible beneficial properties and probiotic potential of B. bifidum strain CNCM I-4319. In silico genome analysis and growth experiments confirmed the expected ability of this strain to consume HMOs and mucin. By employing various animal models, we were also able to assess the ability of B. bifidum CNCM I-4319 to preserve gut integrity and functionality from stress-induced and inflammatory damage, thereby enforcing its potential as an effective probiotic strain.

| S-EPMC7565306 | biostudies-literature

Bifidobacterium bifidum NCIMB 41171

Project description:Reference genome for the Human Microbiome Project

| PRJNA30055 | ENA

Bifidobacterium bifidum

Project description:Identification of reference genes for quantitative Real-Time PCR in Bifidobacterium bifidum PRL2010 based on transcriptome analysis

| PRJNA144187 | ENA

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data