Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Chikungunya virus

ABSTRACT: Genome sequencing of Chikungunya virus from the Americas

PROVIDER: PRJNA294670 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR7592270.fastq.gz	Fastqsanger.gz
	SRR7592270_1.fastq.gz	Fastqsanger.gz
	SRR7592270_2.fastq.gz	Fastqsanger.gz
	SRR7592271.fastq.gz	Fastqsanger.gz
	SRR7592271_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 3028

Similar Datasets

Chikungunya virus

Project description:Chikungunya virus Genome sequencing

| PRJNA473275 | ENA

Chikungunya virus

Project description:Chikungunya virus Genome sequencing - Sudan outbreak 2018

| PRJNA668673 | ENA

Chikungunya virus

Project description:Chikungunya virus genomes from Bolivia

| PRJNA609363 | ENA

chikungunya virus

Project description:chikungunya virus Puerto Rico-S6 metagenome

| PRJNA281533 | ENA

Genome sequencing of Chikungunya virus

Project description:Genome sequencing of Chikungunya virus

| PRJEB8862 | ENA

Transcription profiling by array of Vero cells infected by different Chikungunya virus strains to identify common human host genes involved in pathogenesis of different Chikungunya viruses

Project description:In this study, we aim to identify common host genes involved in pathogenesis of different Chikungunya virus strains as an attempt to recognize probable antiviral targets. We have compared the host gene regulation after infection of monkey kidney cell line (Vero) with two different wild type CHIKV strains i.e. S 27 (human, ECSA), and DRDE-06 (human, ECSA). Vero cells were mock infected or infected with two Chikungunya virus strains (S 27 and DRDE-06) and harvested at 8hpi and 18hpi. The total RNA was extracted and microarray was done using Agilent protocol.

2021-10-28 | E-MTAB-6645 | biostudies-arrayexpress

Transcriptome profile of the host antiviral response to Chikungunya virus infection in human monocyte-derived macrophages (MDMs)

Project description:Chikungunya virus (CHIKV) infection is characterized by alterations in gene expression profile on host cells that consequently lead to an immune response. Here, we used RNA sequencing to analyze the mRNA expression profile in human monocyte-derived macrophages (MDMs) infected with a Colombian clinical isolate of CHIKV at 6 and 24 hpi. analyze the mRNA expression profile in the human monocyte-derived macrophages infected at 6 and 24 hrs with a Colombian clinical isolate of Chikungunya virus.

2022-01-19 | GSE193977 | GEO

Chikungunya virus strain:06113879

Project description:Chikungunya virus strain:06113879 Raw sequence reads

| PRJNA450500 | ENA

Chikungunya virus

Project description:A field diagnosis and genotyping of chikungunya virus by a dried RT-LAMP and MinION sequencing

| PRJDB7465 | ENA

Chikungunya virus in Italy 2017

Project description:Chikungunya virus outbreak in Italy 2017

| PRJEB23510 | ENA