Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Escherichia coli strain:DE205B

ABSTRACT: Avian Pathogenic Escherichia coli transcriptomic raw sequence reads

PROVIDER: PRJNA299423 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR2864020_1.fastq.gz	Fastqsanger.gz
	SRR2864020_2.fastq.gz	Fastqsanger.gz
	SRR2864013_1.fastq.gz	Fastqsanger.gz
	SRR2864013_2.fastq.gz	Fastqsanger.gz
	SRR2864014_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 16

Similar Datasets

Psychological Evaluation According Colonic Colonization by Escherichia Coli of Patients After Colorectal Surgery

Project description:The purpose of this study is to determine whether the presence of pathogenic Escherichia coli in colon is associated with psychiatric disorders.

| 2230352 | ecrin-mdr-crc

Expression data from an Avian pathogenic Escherichia coli strain

Project description:Avian pathogenic Escherichia coli strains frequently cause extra-intestinal infections and are responsible for significant economic losses in the poultry industry worldwide. APEC isolates are closely related to human extraintestinal pathogenic E.coli strains and may also act as pathogens for humans. In this work, three type VI secretion systems were deleted to analyze which pathogenicity characteristics would change in the mutants, compared to wild type strain (SEPT 362). Four Avian Pathogenic Escherichia coli strains (one wild type and three deleted mutants) were grown at 37°C in Dulbecco´s Modified Eagle´s Media (DMEM) media until reach O.D 600 = 0.8, for RNA extraction and hybridization on Affymatrix microarrays.

2010-09-09 | E-GEOD-21893 | biostudies-arrayexpress

Escherichia coli

Project description:Avian pathogenic Escherichia coli

| PRJNA592536 | ENA

Expression data from an Avian pathogenic Escherichia coli strain

2010-09-10 | GSE21893 | GEO

Escherichia coli O08

Project description:Avian Pathogenic Escherichia coli genome sequence

| PRJNA174049 | ENA

Escherichia coli S17

Project description:Avian Pathogenic Escherichia coli genome sequence

| PRJNA174048 | ENA

Escherichia coli SEPT362

Project description:Avian Pathogenic Escherichia coli genome sequence

| PRJNA167774 | ENA

Expression data from Avian Pathogenic Escherichia coli

Project description:Avian Pathogenic Escherichia coli (APEC) are a group of extra-intestinal E. coli that infect poultry, and are able to cause a variety of diseases, systemic or localized, collectively designated as colibacillosis. Colibacillosis is the most common bacterial illness in poultry production, resulting in significant economic losses world-wide. Despite of its importance, pathogenicity mechanisms of APEC strains remain not completelly elucidated and available vaccines are not fully effectives. In order to better understand which genes could be related to pathogenicity in different APEC isolated, a microarray analyses of two APEC strains representing: Swollen Head Syndrome and Omphalitis was carried out.

2013-06-18 | GSE48015 | GEO

Escherichia coli

Project description:Broiler chicken avian pathogenic Escherichia coli

| PRJNA320314 | ENA

Expression data from Avian Pathogenic Escherichia coli

2013-06-18 | E-GEOD-48015 | biostudies-arrayexpress