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Phaeodactylum tricornutum

ABSTRACT: Phaeodactylum tricornutum Transcriptome or Gene expression

PROVIDER: PRJNA320934 | ENA |

REPOSITORIES: ENA

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Dataset's files

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			Action	DRS
	SRR3484433_1.fastq.gz	Fastqsanger.gz
	SRR3484433_2.fastq.gz	Fastqsanger.gz
	SRR3484434_1.fastq.gz	Fastqsanger.gz
	SRR3484434_2.fastq.gz	Fastqsanger.gz
	SRR3484435_1.fastq.gz	Fastqsanger.gz

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Project description:We have done next generation sequencing of optically thin, exponentialy growing Phaeodactylum tricornutum cultures grown with and without nitrogen source to improve our undestanding of the pathways regulation under conditions that promote lipid accumulation (N-starvation). 3 biologically independent exponentially growing culture of Phaeodactylum tricornutum were pelleted and washed several times with N-free media. Each culture was devided to 2 replicates with initial cell concentration of 2X105 cells/mL, one with NaNO3 as nitrogen source and the other without any nitrogen source. The cuture were bubbled foro 48 hours and sampled for transcriptome together with other physiological parameters and lipid analysis.

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Thermal transcriptome of Phaeodactylum tricornutum in steady-state growth

Project description:Here we use a transcriptomic approach to investigate the molecular underpinnings of thermal acclimation in the model diatom species Phaeodactylum tricornutum by comparing the differential gene expression in cultures acclimated to sub-optimal, optimal, and supra-optimal temperatures (10, 20 and 26.5 °C, respectively).

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