Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Aequorivita viscosa strain:CGMCC 1.11023 | isolate:CGMCC 1.11023

ABSTRACT: Aequorivita viscosa CGMCC 1.11023 genome sequencing

PROVIDER: PRJNA323084 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR4217037_1.fastq.gz	Fastqsanger.gz
	SRR4217037_2.fastq.gz	Fastqsanger.gz

Items per page:

1 - 2 of 2

Similar Datasets

Aequorivita viscosa

Project description:Aequorivita viscosa overview

| PRJNA342722 | ENA

Aequorivita viscosa strain:dsm 26349

Project description:Aequorivita viscosa DSM 26349 genome sequencing

| PRJNA303318 | ENA

Brevundimonas viscosa strain:CGMCC 1.10683 | isolate:CGMCC 1.10683

Project description:Brevundimonas viscosa CGMCC 1.10683 genome sequencing

| PRJNA323092 | ENA

Project description:Aequorivita viscosa CGMCC 1.11023

| PRJEB16593 | ENA

Aequorivita

Project description:Aequorivita Genome sequencing and assembly

| PRJNA557540 | ENA

Xerophyta viscosa

Project description:Xerophyta viscosa Genome sequencing and assembly

| PRJNA291133 | ENA

Aequorivita iocasae strain:KX20305

Project description:Aequorivita iocasae strain:KX20305 Genome sequencing

| PRJNA692781 | ENA

Co-cultivation and transcriptome sequencing of two co-existing fish pathogens Moritella viscosa and Aliivibrio wodanis.

Project description:Aliivibrio wodanis and Moritella viscosa have often been isolated together from fish with winter ulcer. Little is known about the interaction between the two bacterial species and how the presence of one bacterial species affects the behaviour of the other. The impact on bacterial growth in co-culture was investigated in vitro, and the presence of A. wodanis has a strong inhibitorial effect on M. viscosa. Further, we have sequenced the complete genomes of these two marine Gram-negative species, and have performed transcriptome analysis of the bacterial gene expression levels from in vivo samples. Using bacterial implants in the fish abdomen, we demonstrate that the presence of A. wodanis is altering the gene expression levels of M. viscosa compared to when the bacteria are implanted separately. The impeding effect on growth and the change in the global gene expression pattern of M. viscosa when the two pathogens co-exists is discussed in this paper.

2014-11-30 | E-MTAB-2851 | biostudies-arrayexpress

Aequorivita sp. JGI_SA12_F02_006

Project description:Aequorivita sp. JGI_SA12_F02_006 Genome sequencing

| PRJNA585608 | ENA

Calocera viscosa

Project description:Calocera viscosa overview

| PRJNA201524 | ENA