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Paracoccus denitrificans

ABSTRACT: RNA-seq data of Paracoccus denitrificans grown under different N2O levels

PROVIDER: PRJNA338275 | ENA |

REPOSITORIES: ENA

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			Action	DRS
	SRR4015000.fastq.gz	Fastqsanger.gz
	SRR4015001.fastq.gz	Fastqsanger.gz
	SRR4014999.fastq.gz	Fastqsanger.gz

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RNA-seq data of Paracoccus denitrificans grown under different N2O levels

Project description:We report here the RNA seq results of sRNA enriched Paracoccus denitrificans grown under three different N2O levels (high N2O reffered to as CuL/ low N2O reffered to as CuH/ Low N2O aerobic reffered to as CuH O2)

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Project description:Transcriptional profiling of Paracoccus denitrificans PD1222 wild type grown to mid-exponential phase in minimal media with either 13 uM (Cu-H) or 0.5 uM (Cu-L) Cu regimes. The goal was to define the effects of Cu-limitation on denitrification genes Two growth conditions, three biological replicates of each condition. Each sample hybridised in a two-channel hybridization against Paracoccus denitrificans genomic DNA as the comparator/reference, which also acted as a control for spot quality. Cu-concentration 13 uM (Cu-H) versus 0.5 uM Cu (Cu-L) in anaerobic growth conditions.

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Transcriptome analysis of Paracoccus denitrificans during aerobic and anaerobic respiration (denitrification)

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Effect of pH on the proteome of Paracoccus denitrificans PD1222 under denitrifying conditions

Project description:The work is based on the quantitative proteomic analysis free of marking samples of the gram negative denitrification bacteria Paracoccus denitrificans grown at different pH.

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