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Stylosanthes guianensis breed:Reyan 2

ABSTRACT: Stylosanthes guianensis breed:Reyan 2 Transcriptome or Gene expression

PROVIDER: PRJNA431518 | ENA |

REPOSITORIES: ENA

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			Action	DRS
	SRR6649990_1.fastq.gz	Fastqsanger.gz
	SRR6649990_2.fastq.gz	Fastqsanger.gz
	SRR6649991_1.fastq.gz	Fastqsanger.gz
	SRR6649991_2.fastq.gz	Fastqsanger.gz
	SRR6649992_1.fastq.gz	Fastqsanger.gz

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Border-like cells production mediated by SgPG1 proclaims aluminum resistance in Stylosanthes guianensis

Project description:In order to investigate molecular mechanism underlying Reyan No. 2 BLCs development, transcriptomic analysis was conducted in Reyan No. 2 root tips at 24 and 48 h after germination. For each time course, three libraries were constructed and produced around 50 and 52 million raw reads, and 40.5 and 45.5 million clean reads, respectively. A total of 2036 genes, which were involved in various biological processes, such as the cell wall modification, exhibited differential expression patterns between 48 h and 24 h after germination. Among these differential expression genes (DEGs), 467 genes were up-regulated, while 1569 genes were down-regulated. Furthermore, a total of 90 DEGs were predicted to be involved in cell wall modification, with 16 genes up-regulated and 74 genes down-regulated. The qRT-PCR assay was further conducted to investigate the expression levels of 12 randomly selected DEGs, and results were consistent with the assay of transcriptomic analysis

2021-07-21 | GSE179626 | GEO

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