Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Trichoderma reesei strain:d-ara1

ABSTRACT: Trichoderma reesei d-ara1 Gene Expression Profiling - 24 transcriptome

PROVIDER: PRJNA440120 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR6960006.fastq.gz	Fastqsanger.gz

Items per page:

1 - 1 of 1

Similar Datasets

ARA1 regulates not only L-arabinose but also D-galactose catabolism in Trichoderma reesei

Project description:Trichoderma reesei is used to produce saccharifying enzyme cocktails for biofuels. There is limited understanding of the transcription factors (TFs) that regulate the release and catabolism of L-arabinose and D-galactose, as the main TF XYR1 is only partially involved. The T. reesei ortholog of ARA1 from Pyricularia oryzae that regulates L-arabinose release and catabolism, was deleted and characterized by growth profiling and transcriptomics along with a xyr1 mutant and xyr1/ara1 double mutant. Our results show that, in addition to the L-arabinose-related role, T. reesei ARA1 is essential for D-galactose release and catabolism, while XYR1 is not involved in this process.

2017-11-02 | GSE104606 | GEO

Trichoderma reesei strain:d-ara1

Project description:Trichoderma reesei d-ara1 Gene Expression Profiling - 50 transcriptome

| PRJNA440122 | ENA

Trichoderma reesei strain:d-ara1

Project description:Trichoderma reesei d-ara1 Gene Expression Profiling - 54 transcriptome

| PRJNA440126 | ENA

Trichoderma reesei strain:d-ara1

Project description:Trichoderma reesei d-ara1 Gene Expression Profiling - 94a transcriptome

| PRJNA440113 | ENA

Trichoderma reesei strain:d-ara1

Project description:Trichoderma reesei d-ara1 Gene Expression Profiling - 19 transcriptome

| PRJNA440115 | ENA

Trichoderma reesei strain:d-ara1

Project description:Trichoderma reesei d-ara1 Gene Expression Profiling - 83 transcriptome

| PRJNA440131 | ENA

Trichoderma reesei strain:d-ara1

Project description:Trichoderma reesei d-ara1 Gene Expression Profiling - 53 transcriptome

| PRJNA440125 | ENA

Trichoderma reesei strain:d-ara1

Project description:Trichoderma reesei d-ara1 Gene Expression Profiling - 49 transcriptome

| PRJNA440121 | ENA

Trichoderma reesei strain:d-ara1

Project description:Trichoderma reesei d-ara1 Gene Expression Profiling - 52 transcriptome

| PRJNA440124 | ENA

Trichoderma reesei strain:d-ara1

Project description:Trichoderma reesei d-ara1 Gene Expression Profiling - 22 transcriptome

| PRJNA440118 | ENA

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data