Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Sphingomonas aerolata strain:NW12

ABSTRACT: Sphingomonas aerolata NW12 genome sequencing

PROVIDER: PRJNA443263 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	PZZN01.dat.gz	Other
	PZZN01.fasta.gz	Fasta.gz
	PZZN01.master.dat	Other
	SRR7041734_1.fastq.gz	Fastqsanger.gz
	SRR7041734_2.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 6

Similar Datasets

Sphingomonas aerolata

Project description:Sphingomonas aerolata overview

| PRJNA547410 | ENA

Sphingomonas aerolata

Project description:Sphingomonas aerolata Genome sequencing and assembly

| PRJNA847404 | ENA

Sphingomonas aerolata strain:AS2.4

Project description:Sphingomonas aerolata AS2.4 genome sequencing

| PRJNA546675 | ENA

Sphingomonas aerolata strain NW12

Project description:Sphingomonas aerolata strain NW12T synthesize new proteins while airborne

| PRJEB25858 | ENA

Expression analysis of motile strain of Sphingomonas sp. A1

Project description:Investigation of whole genome gene expression level in motile strain of Sphingomonas. sp A1 All flagellar genes in motile strain of Sphingomonas. sp A1 are highly transcribed.

2014-11-01 | GSE62901 | GEO

Expression analysis of motile strain of Sphingomonas sp. A1

Project description:Investigation of whole genome gene expression level in motile strain of Sphingomonas. sp A1 All flagellar genes in motile strain of Sphingomonas. sp A1 are highly transcribed. A two chip study using total RNA recovered from wild-type and motile strains of Sphingomonas. sp A1 grown in 0.5% alginate medium.

2014-11-01 | E-GEOD-62901 | biostudies-arrayexpress

Skermanella aerolata

Project description:Skermanella aerolata overview

| PRJNA399776 | ENA

Nakamurella aerolata strain:DB0629

Project description:Nakamurella aerolata strain:DB0629 Genome sequencing and assembly

| PRJNA629041 | ENA

Skermanella aerolata strain:NBRC 106429

Project description:Skermanella aerolata NBRC 106429 genome sequencing project

| PRJDB6248 | ENA

Organic Nitrogen Source is Critical for Welan Production in Sphingomonas sp. ATCC 31555

Project description:Welan gum is mainly produced by Sphingomonas sp. ATCC 31555 and has broad applications in industry such as that in cement production. Both carbon and nitrogen sources are essential for welan production. However, how nitrogen sources affect the metabolism and gene transcription of welan remains elusive. Here, we used next-generation sequencing RNA-seq to analyze the transcriptome of Sphingomonas sp. ATCC 31555 in the presence of inorganic or organic nitrogen sources. Enriched gene expression and pathway analysis suggest that organic nitrogen sources significantly enhanced the expression of genes in central metabolic pathways of Sphingomonas sp. ATCC 31555 and those critical for welan synthesis compared to that observed using inorganic nitrogen sources. The present study improves our understanding of the molecular mechanism underlying the use of nitrogen in welan synthesis in Sphingomonas sp., as well as provides an important transcriptome resource for Sphingomonas sp. in relation to nitrogen sources.

2016-03-25 | GSE79497 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data