Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Helianthus annuus and Orobanche cumana Raw sequence reads

PROVIDER: PRJNA509308 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR8302240.fastq.gz	Fastqsanger.gz
	SRR8302240_1.fastq.gz	Fastqsanger.gz
	SRR8302240_2.fastq.gz	Fastqsanger.gz
	SRR8302250.fastq.gz	Fastqsanger.gz
	SRR8302250_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 54

Similar Datasets

Project description:Helianthus annuus and Orobanche cumana Raw sequence reads

| PRJNA509308 | ENA

Soil treatment with D74 invokes the defense mechanism of Helianthus annuus against Orobanche cumana

Project description:Soil treatment with D74 invokes the defense mechanism of Helianthus annuus against Orobanche cumana Raw sequence reads

| PRJNA830293 | ENA

An Orobanche cernua x Orobanche cumana segregating population provides insight into the regulation of germination specificity in a parasitic plant

Project description:Germination of seeds of Orobanche species requires specific chemicals exuded by host roots. A family of “divergent” KARRIKIN INSENSITIVE2 (KAI2d) genes encode proteins that recognize strigolactone (SL) class germination simulants. We explored specificity of germination stimulant detection by analyzing interspecific segregants of a cross between Orobanche cernua and O. cumana, closely related species that differ in stimulant response. O. cernua parasitizes tomato and germinates in response to the SL orobanchol, while O. cumana parasitizes sunflower and responds to dehydrocostus lactone (DCL). KAI2d genes were catalogued in parents and in segregants that showed stimulant specificity. KAI2d genes were also functionally assayed in the Arabidopsis kai2 mutant background. We identified five full-length KAI2d genes in O. cernua and eight in O. cumana. The O. cernua KAI2d2, as well as its ortholog in O. cumana, are associated with SL perception. A cluster of O. cumana KAI2d genes was genetically linked to DCL perception, although no specific receptor gene was identified by heterologous complementation. These findings support the KAI2d-mediated perception of SLs, but fall short of explaining how O. cumana perceives DCL. The ability of some O. cumana KAI2d genes to detect SLs points to the involvement of additional factors in regulating stimulant specificity.

2022-02-20 | GSE196954 | GEO

Helianthus annuus

Project description:Helianthus annuus Raw sequence reads

| PRJNA526417 | ENA

Helianthus annuus

Project description:Helianthus annuus raw sequence reads

| PRJNA666490 | ENA

Helianthus annuus

Project description:Helianthus annuus Raw sequence reads

| PRJNA1012377 | ENA

Helianthus annuus

Project description:Helianthus annuus Raw sequence reads