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Candidatus Erwinia dacicola strain:EdA2

ABSTRACT: Candidatus Erwinia dacicola strain:EdA2 Genome sequencing and assembly

PROVIDER: PRJNA520994 | ENA |

REPOSITORIES: ENA

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			Action	DRS
		Other
	SEZT01.dat.gz	Other
	SEZT01.fasta.gz	Fasta.gz
	SEZT01.master.dat	Other

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Candidatus Erwinia dacicola

Project description:Candidatus Erwinia dacicola overview

| PRJNA328048 | ENA

Candidatus Erwinia dacicola

Project description:Candidatus Erwinia dacicola Genome sequencing and assembly

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Candidatus Erwinia dacicola strain:Oroville

Project description:Candidatus Erwinia dacicola genome sequencing

| PRJNA288714 | ENA

Candidatus Erwinia dacicola strain:EdB2

Project description:Candidatus Erwinia dacicola strain:EdB2 Genome sequencing and assembly

| PRJNA520996 | ENA

erwinia chrysanthemi treatments-BOS1 signaling pathway in Arabidopsis thaliana / Erwinia chrysanthemi interaction

Project description:ra06-04_bos1 - erwinia chrysanthemi treatments - BOS1 signaling pathway in Arabidopsis thaliana / Erwinia chrysanthemi interaction - Comparison of 4 transcriptoms : Wt Arabidopsis ecotype infected by Wt Erwinia chrysanthemi strain, bos1 Arabidopsis mutant infected by Wt Erwinia chrysanthemi strain, Wt Arabidopsis ecotype infected by BOS1-non inducing pelBC Erwinia chrysanthemi mutant, Wt Arabidopsis ecotype buffer inoculated. Experiments were repeated 3 times. Keywords: normal vs disease comparison

2009-06-13 | GSE11793 | GEO

erwinia chrysanthemi treatments-BOS1 signaling pathway in Arabidopsis thaliana / Erwinia chrysanthemi interaction

2009-06-13 | E-GEOD-11793 | biostudies-arrayexpress

Draft Genome Sequence of the Bactrocera oleae Symbiont "Candidatus Erwinia dacicola".

Project description:"Candidatus Erwinia dacicola" is a Gammaproteobacterium that forms a symbiotic association with the agricultural pest Bactrocera oleae Here, we present a 2.1-Mb draft hybrid genome assembly for "Ca. Erwinia dacicola" generated from single-cell and metagenomic data.

| S-EPMC5026430 | biostudies-other

erwinia-Regulation of the Arabidopsis transcriptome by the type three secretion system (TTSS) of Erwinia amylovora

Project description:ra05-02_erwinia - erwinia - Identification of Arabidopsis genes regulataed by Erwinia amylovora and of a subset of Arabiddopsis genes regulated by the type three secretion system of Erwinia amylovora. Keywords: normal vs disease comparison

2007-08-09 | GSE8701 | GEO

Olive fruit fly rearing procedures affect the vertical transmission of the bacterial symbiont Candidatus Erwinia dacicola.

Project description:BACKGROUND:The symbiosis between the olive fruit fly, Bactrocera oleae, and Candidatus Erwinia dacicola has been demonstrated as essential for the fly's larval development and adult physiology. The mass rearing of the olive fruit fly has been hindered by several issues, including problems which could be related to the lack of the symbiont, presumably due to preservatives and antibiotics currently used during rearing under laboratory conditions. To better understand the mechanisms underlying symbiont removal or loss during the rearing of lab colonies of the olive fruit fly, we performed experiments that focused on bacterial transfer from wild female flies to their eggs. In this research, eggs laid by wild females were treated with propionic acid solution, which is often used as an antifungal agent, a mixture of sodium hypochlorite and Triton X, or water (as a control). The presence of the bacterial symbiont on eggs was evaluated by real-time PCR and scanning electron microscopy. RESULTS:DGGE analysis showed a clear band with the same migration behavior present in all DGGE profiles but with a decreasing intensity. Molecular analyses performed by real-time PCR showed a significant reduction in Ca. E. dacicola abundance in eggs treated with propionic acid solution or a mixture of sodium hypochlorite and Triton X compared to those treated with water. In addition, the removal of bacteria from the surfaces of treated eggs was highlighted by scanning electron microscopy. CONCLUSIONS:The results clearly indicate how the first phases of the colony-establishment process are important in maintaining the symbiont load in laboratory populations and suggest that the use of products with antimicrobial activity should be avoided. The results also suggest that alternative rearing procedures for the olive fruit fly should be investigated.

| S-EPMC6918546 | biostudies-literature

fireman vs wt erwinia infection-Impact of the fireman mutation in the Erwinia amylovora response of Arabidopsis

Project description:adt09-02_fireman - fireman vs wt erwinia infection - A meta-analysis ot the CATMA transcriptomic data has shown that an orphan gene of Arabidopsis: AT5E39460, recently remaned AT5G 44585, is highly responsive to biotic stresses. An homozygous mutant of this gene, named fireman has been produced and displays less cell death symptoms in comparison to the wild type in response to Erwinia amylovora infection. The purpose of this transcriptomic analysis is to understand which pathways are altered in this mutant versus the wild-type in response to this phytopathogenic bacteria. - 3 inoculated leaves of 5 weeks old plants, per plant, have been harvested 24h after inoculation with H20 or E. amylovora, strain 1430. Keywords: normal vs disease comparison, normal vs transgenic comparaison

2011-07-15 | GSE22683 | GEO

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