RNA-seq for MDCKII 3D and 2D epithelial morphogenesis.
Ontology highlight
ABSTRACT:
PROVIDER: PRJNA532909 | ENA |
REPOSITORIES: ENA
Dataset's files
| Action | DRS | |||
|---|---|---|---|---|
| SRR8899800_1.fastq.gz | Fastqsanger.gz | |||
| SRR8899800_2.fastq.gz | Fastqsanger.gz | |||
| SRR8899810_1.fastq.gz | Fastqsanger.gz | |||
| SRR8899810_2.fastq.gz | Fastqsanger.gz | |||
| SRR8899820_1.fastq.gz | Fastqsanger.gz |
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Project description:ATAC-seq for MDCKII 3D and 2D epithelial morphogenesis
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Project description:We performed time-course RNA-seq experiments for MDCKII 3D cell culture, and included seeding day0 cells and over-confluent 2D cells. To study how intracellular trafficking affects transcriptome changes, we also profiled trancriptome of DENND5A and AVL9 KD MDCKII cells by RNA-seq.
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