Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Bursaphelenchus mucronatus isolate:ZJ-2014

ABSTRACT: Bursaphelenchus mucronatus isolate:ZJ-2014 Genome sequencing

PROVIDER: PRJNA562094 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR10271304_1.fastq.gz	Fastqsanger.gz
	SRR10271304_2.fastq.gz	Fastqsanger.gz
	SRR10271305_1.fastq.gz	Fastqsanger.gz
	SRR10271305_2.fastq.gz	Fastqsanger.gz
	SRR10271306_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 27

Similar Datasets

Bursaphelenchus mucronatus

Project description:Bursaphelenchus mucronatus overview

| PRJNA318550 | ENA

Bursaphelenchus mucronatus

Project description:Bursaphelenchus mucronatus genome and transcriptome analysis

| PRJDB3460 | ENA

Bursaphelenchus mucronatus

Project description:Bursaphelenchus mucronatus RNA-seq Raw sequence reads

| PRJNA318510 | ENA

Bursaphelenchus mucronatus whole transcriptome

Project description:Bursaphelenchus mucronatus whole transcriptome

| PRJEB14884 | ENA

Pantoea stewartii strain:ZJ-FGZX1 | isolate:ZJ-FGZX

Project description:Pantoea stewartii strain:ZJ-FGZX1 | isolate:ZJ-FGZX Genome sequencing

| PRJNA607905 | ENA

Bursaphelenchus xylophilus isolate:AmA3

Project description:Bursaphelenchus xylophilus isolate:AmA3 Transcriptome or Gene expression

| PRJNA294820 | ENA

Bursaphelenchus xylophilus isolate:BXYZJ01

Project description:Bursaphelenchus xylophilus isolate:BXYZJ01 Genome sequencing and assembly

| PRJNA381109 | ENA

Plasmodiophora brassicae isolate:ZJ-1

Project description:Plasmodiophora brassicae isolate:ZJ-1 Genome sequencing and assembly

| PRJNA335327 | ENA

Orientia tsutsugamushi strain:Wuj/2014 | isolate:Wuj/2014

Project description:Orientia tsutsugamushi strain:Wuj/2014 | isolate:Wuj/2014 Genome sequencing

| PRJNA563989 | ENA

Bursaphelenchus xylophilus and B. mucronatus secretomes: a comparative proteomic analysis.

Project description:The pinewood nematode, Bursaphelenchus xylophilus, recognized as a worldwide major forest pest, is a migratory endoparasitic nematode with capacity to feed on pine tissues and also on fungi colonizing the trees. Bursaphelenchus mucronatus, the closest related species, differs from B. xylophilus on its pathogenicity, making this nematode a good candidate for comparative analyses. Secretome profiles of B. xylophilus and B. mucronatus were obtained and proteomic differences were evaluated by quantitative SWATH-MS. From the 681 proteins initially identified, 422 were quantified and compared between B. xylophilus and B. mucronatus secretomes and from these, 243 proteins were found differentially regulated: 158 and 85 proteins were increased in B. xylophilus and B. mucronatus secretomes, respectively. While increased proteins in B. xylophilus secretome revealed a strong enrichment in proteins with peptidase activity, the increased proteins in B. mucronatus secretome were mainly related to oxidative stress responses. The changes in peptidases were evaluated at the transcription level by RT-qPCR, revealing a correlation between the mRNA levels of four cysteine peptidases with secretion levels. The analysis presented expands our knowledge about molecular basis of B. xylophilus and B. mucronatus hosts interaction and supports the hypothesis of a key role of secreted peptidases in B. xylophilus pathogenicity.

| S-EPMC5150578 | biostudies-literature

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data