Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Integrative analysis of reference epigenomes in rice [FAIRE-seq]

ABSTRACT: Integrative analysis of reference epigenomes in rice [FAIRE-seq]

PROVIDER: PRJNA597215 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR10755100_1.fastq.gz	Fastqsanger.gz
	SRR10755100_2.fastq.gz	Fastqsanger.gz
	SRR10755101_1.fastq.gz	Fastqsanger.gz
	SRR10755101_2.fastq.gz	Fastqsanger.gz
	SRR10755102_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 116

Similar Datasets

Integrative analysis of reference epigenomes in rice

Project description:Integrative analysis of reference epigenomes in rice

| PRJNA597477 | ENA

Integrative analysis of reference epigenomes in rice [BiSulfite-seq]

Project description:Integrative analysis of reference epigenomes in rice [BiSulfite-seq]

| PRJNA597475 | ENA

Integrative analysis of reference epigenomes in rice [ChIP-seq]

Project description:Integrative analysis of reference epigenomes in rice [ChIP-seq]

| PRJNA597065 | ENA

Integrative analysis of reference epigenomes in rice [RNA-seq]

Project description:Integrative analysis of reference epigenomes in rice [RNA-seq]

| PRJNA597070 | ENA

Integrative analysis of reference epigenomes in rice [ChIP-reChIP-seq]

Project description:Integrative analysis of reference epigenomes in rice [ChIP-reChIP-seq]

| PRJNA597478 | ENA

Integrative analysis of reference epigenomes in rice [FAIRE-seq]

Project description:Approximately 73% of rice genomes were annotated with different epigenomic properties. Refinement of promoter regions using open chromatin and H3K4me3-marked regions provided insight into transcriptional regulation. Active and repressed histone modifications and the predicted enhancers varied largely across tissues, whereas inactive chromatin states were relatively stable. Further, we investigated the impact of genetic variants on epigenomic signals and gene expression. Together, these datasets constitute a resource for functional element annotation in rice and indicate the central role of epigenomic information in understanding transcriptional regulation.

2020-04-25 | GSE142501 | GEO