Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Cyanobacteria

ABSTRACT: Cyanobacteria Genome sequencing and assembly

PROVIDER: PRJNA616171 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other
	JAAVJL01.dat.gz	Other
	JAAVJL01.fasta.gz	Fasta.gz
	JAAVJL01.master.dat	Other
	SRR11458705.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 7

Similar Datasets

Cyanobacteria

Project description:Cyanobacteria Genome sequencing and assembly

| PRJNA448332 | ENA

Cyanobacteria

Project description:Cyanobacteria overview

| PRJNA187002 | ENA

Global RNA half lives in cyanobacteria

Project description:We calculated global RNA half lives for all genes in the cyanobacteria Synechococcus sp. strain PCC 7002. Samples from three replicates of the WT strain were taken before and following the addition of the antibiotic rifampicin to stop nascent transcription. RNA spike-ins were added for normalization and using the number of RNA-sequencing reads we were able to calculate half lives for genes, transcripts, and for each position on the genome.

2019-01-01 | GSE109174 | GEO

Cyanobacteria

Project description:Genome Sequencing Project of the NIES cyanobacteria collection 2016

| PRJDB5665 | ENA

Measurement of genome-wide gene expression in cyanobacteria grown under simluated natural light conditions [RNA-Seq]

Project description:We used RNA sequencing to measure genome-wide gene expression in the cyanobacterium Synechococcus elongatus PCC 7942 grown under dynamic light regimes that mimic the variation in light intensity seen on a Clear Day in nature, or the rapid changes in light intensity that accompany changes in shading We compare these gene expression dynamics to those of a culture grown under a Low Light condition that mimics the standard laboratory conditions used for study of cyanobacteria. Our analysis reveals that naturally relevant light conditions drastically modify gene expression dynamics in cyanobacteria Notably, the expression of circadian clock-controlled genes is responsive to changes in light intensity, showing modulated dynamics that can allow cyanobacteria to adapt their metabolism to changing environmental conditions

2017-12-16 | GSE104203 | GEO

Cyanobacteria phage

Project description:Cyanobacteria phage Metagenome

| PRJNA522368 | ENA

Cyanobacteria bacterium

Project description:Cyanobacteria bacterium overview

| PRJNA586990 | ENA

Cyanobacteria

Project description:Collection of cyanobacteria at NWU, South Africa

| PRJNA680469 | ENA

Comparison of the transcriptome, translatome and proteome response to diurnal oscillations in cyanobacteria

Project description:The aim of this study was to find the cause for the previously reported inconsistency between oscillating transcription and constant protein levels under day-night growth conditions in cyanobacteria. To determine whether translational regulation counteracts transcriptional changes, Synechocystis sp. PCC 6803 was cultivated in an artificial day-night setting and the level of transcription, translation and protein was measured across the genome at different time points using mRNA sequencing, ribosome profiling and quantitative proteomics. This proteomics data set represents one layer of a larger data set covering three 'omics' levels.

2021-09-10 | PXD023812 | Pride

LFMS sediment cyanobacteria

Project description:LFMS sediment cyanobacteria

| PRJEB40693 | ENA