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Acromyrmex echinatior

ABSTRACT: Acromyrmex echinatior overview

PROVIDER: PRJNA62767 | ENA |

REPOSITORIES: ENA

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Dataset's files

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			Action	DRS
		Other
	AEVX01.dat.gz	Other
	AEVX01.fasta.gz	Fasta.gz
	AEVX01.master.dat	Other
	SRR1015500_1.fastq.gz	Fastqsanger.gz

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Caste-specific RNA editomes in the leaf-cutting ant Acromyrmex echinatior

Project description:Eusocial insects have evolved the capacity to generate adults with distinct morphological, reproductive and behavioural phenotypes from the same genome. Recent studies suggest that RNA editing might enhance the diversity of gene products at the post-transcriptional level, particularly to induce functional changes in the nervous system. Using head samples from the leaf-cutting ant Acromyrmex echinatior, we compare RNA editomes across eusocial castes, identifying ca. 11,000 RNA editing sites in gynes, large workers and small workers. Those editing sites map to 800 genes functionally enriched for neurotransmission, circadian rhythm, temperature response, RNA splicing and carboxylic acid biosynthesis. Most A. echinatior editing sites are species specific, but 8M-bM-^@M-^S23% are conserved across ant subfamilies and likely to have been important for the evolution of eusociality in ants. The level of editing varies for the same site between castes, suggesting that RNA editing might be a general mechanism that shapes caste behaviour in ants. Analysis of genome-wide RNA editing in three different female castes of the the leaf-cutting ant Acromyrmex echinatior.

2014-10-02 | E-GEOD-51576 | biostudies-arrayexpress

Caste-specific RNA editomes in the leaf-cutting ant Acromyrmex echinatior

Project description:Eusocial insects have evolved the capacity to generate adults with distinct morphological, reproductive and behavioural phenotypes from the same genome. Recent studies suggest that RNA editing might enhance the diversity of gene products at the post-transcriptional level, particularly to induce functional changes in the nervous system. Using head samples from the leaf-cutting ant Acromyrmex echinatior, we compare RNA editomes across eusocial castes, identifying ca. 11,000 RNA editing sites in gynes, large workers and small workers. Those editing sites map to 800 genes functionally enriched for neurotransmission, circadian rhythm, temperature response, RNA splicing and carboxylic acid biosynthesis. Most A. echinatior editing sites are species specific, but 8–23% are conserved across ant subfamilies and likely to have been important for the evolution of eusociality in ants. The level of editing varies for the same site between castes, suggesting that RNA editing might be a general mechanism that shapes caste behaviour in ants.

2014-10-02 | GSE51576 | GEO

Acromyrmex echinatior

Project description:Caste-specific RNA editomes in the leaf-cutting ant Acromyrmex echinatior

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Acromyrmex echinatior strain:colony Ae372

Project description:Acromyrmex echinatior genome sequencing project.

| PRJNA62733 | ENA

Acromyrmex echinatior genome sequencing project

Project description:The genome of the leaf-cutting ant Acromyrmex echinatior

| PRJEB2532 | ENA

Acromyrmex insinuator

Project description:Acromyrmex insinuator overview

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GNPS-MS/MS molecular networking uncover a richer diversity of secondary metabolites on the bacterial community of the fungus-growing ant Acromyrmex echinatior

Project description:Chemical profiles of 93 bacterial strains associated to Acromyrmex echinatior nest from Panama.

2018-08-03 | MSV000082748 | GNPS

Sperm mixing in the polyandrous leaf-cutting ant Acromyrmex echinatior.

Project description:The insemination of queens by sperm from multiple males (polyandry) has evolved in a number of eusocial insect lineages despite the likely costs of the behavior. The selective advantages in terms of colony fitness must therefore also be significant and there is now good evidence that polyandry increases genetic variation among workers, thereby improving the efficiency of division of labor, resistance against disease, and diluting the impact of genetically incompatible matings. However, these advantages will only be maximized if the sperm of initially discrete ejaculates are mixed when stored in queen spermathecae and used for egg fertilization in a "fair raffle." Remarkably, however, very few studies have addressed the level of sperm mixing in social insects. Here we analyzed sperm use over time in the highly polyandrous leaf-cutting ant Acromyrmex echinatior. We genotyped cohorts of workers produced either 2 months apart or up to over a year apart, and batches of eggs laid up to over 2 years apart, and tested whether fluctuations in patriline distributions deviated from random. We show that the representation of father males in both egg and worker cohorts does not change over time, consistent with obligatorily polyandrous queens maximizing their fitness when workers are as genetically diverse as possible.

| S-EPMC4224532 | biostudies-literature

Caste-specific RNA editomes in the leaf-cutting ant Acromyrmex echinatior.

Project description:Eusocial insects have evolved the capacity to generate adults with distinct morphological, reproductive and behavioural phenotypes from the same genome. Recent studies suggest that RNA editing might enhance the diversity of gene products at the post-transcriptional level, particularly to induce functional changes in the nervous system. Using head samples from the leaf-cutting ant Acromyrmex echinatior, we compare RNA editomes across eusocial castes, identifying ca. 11,000 RNA editing sites in gynes, large workers and small workers. Those editing sites map to 800 genes functionally enriched for neurotransmission, circadian rhythm, temperature response, RNA splicing and carboxylic acid biosynthesis. Most A. echinatior editing sites are species specific, but 8-23% are conserved across ant subfamilies and likely to have been important for the evolution of eusociality in ants. The level of editing varies for the same site between castes, suggesting that RNA editing might be a general mechanism that shapes caste behaviour in ants.

| S-EPMC4200514 | biostudies-literature

Acromyrmex insinuator

Project description:Acromyrmex insinuator Genome sequencing and assembly

| PRJNA551382 | ENA