Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Leptosphaeria maculans JN3 strain:(isolate v23.1.3)

ABSTRACT: Leptosphaeria maculans JN3 Genome sequencing

PROVIDER: PRJNA63129 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Similar Datasets

Gene expression profile in MS medium for the phytopathogenic fungus Leptosphaeria maculans brassicae (Lmb) and lepidii (Lml)

Project description:Full transcriptomes of Leptosphaeria maculans ‘brassicae’ v23.1.3 and Leptosphaeria maculans ‘lepidii’ IBCN84, grown in Fries medium, were studied.

2021-06-02 | GSE150126 | GEO

Leptosphaeria maculans

Project description:Leptosphaeria maculans Raw sequence reads

| PRJNA474976 | ENA

Leptosphaeria maculans

Project description:Leptosphaeria maculans Raw sequence reads

| PRJNA636281 | ENA

Leptosphaeria maculans strain:04MGPS021

Project description:Leptosphaeria maculans strain:04MGPS021 Genome sequencing

| PRJNA254435 | ENA

Leptosphaeria maculans strain:06MGPP041

Project description:Leptosphaeria maculans strain:06MGPP041 Genome sequencing

| PRJNA254436 | ENA

Leptosphaeria maculans gene expression during in vitro growth and primary oilseed rape leaf infection

2011-02-09 | GSE27152 | GEO

Leptosphaeria maculans gene expression during in vitro growth and primary oilseed rape leaf infection

Project description:The transcriptome of Leptosphaeria maculans was analyzed in mycelium and during oilseed rape (Brassica napus) leaf infection. The array probes were designed from gene models from the L. maculans whole genome annotation. One aim of this study was to verify the expression of the automatically annotated gene models in various conditions. Another goal was to monitor gene expression profiles during oilseed rape leaf infection and to highlight tissue-specific transcripts, e.g. in plant up-regulated transcripts, for further analyses. We performed 9 hybridizations (NimbleGen) with samples derived from mycelium and infected oilseed rape leaves. Samples from infected oilseed rape leaves were harvested 7 and 14 days post infection. Three replicates each. All samples were labeled with Cy3.

2011-02-09 | E-GEOD-27152 | biostudies-arrayexpress

Leptosphaeria maculans

Project description:Leptosphaeria maculans inoculated on Brassica napus host. Transcriptome

| PRJNA328045 | ENA

Leptosphaeria maculans

Project description:Dual-RNAseq of Leptosphaeria maculans inoculated to canola

| PRJNA327693 | ENA

Leptosphaeria maculans gene expression during in vitro growth after silencing of DIM5 or HP1, two genes involved in chromatin remodelling

Project description:The transcriptome of Leptosphaeria maculans was analysed in mycelium of the wild type isolate v23.1.3 or in transformants silenced for DIM5 or HP1, two genes encoding enzymes involved in chromatin remodelling. The array probes were designed from gene models from the L. maculans whole genome annotation. The aim of this study was to characterise the effect of chromatin remodelling on gene expression during in vitro growth.

2014-03-06 | GSE50616 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data