Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Single Cell RNA Sequencing of mouse kidneys

ABSTRACT: Single Cell RNA Sequencing of mouse kidneys

PROVIDER: PRJNA667943 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR12789840.fastq.gz	Fastqsanger.gz
	SRR12789841.fastq.gz	Fastqsanger.gz
	SRR12789842.fastq.gz	Fastqsanger.gz
	SRR12789843.fastq.gz	Fastqsanger.gz
	SRR12789844.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 8

Similar Datasets

Single Cell RNA Sequencing of mouse kidneys

Project description:Unbiased single-cell RNA-sequencing in freshly-dissociated cells from healthy and stenotic mouse kidneys identified stenotic-kidneys epithelial cells undergoing both mesenchymal transition and senescence.

2021-06-30 | GSE159204 | GEO

Single-cell RNA-seq in mouse kidneys after IRI

Project description:Single-cell RNA-seq in mouse kidneys after IRI

| PRJNA675866 | ENA

Single cell RNA-sequencing of human fetal kidneys

Project description:Single cell RNA-sequencing of human fetal kidneys

| PRJNA471694 | ENA

Single-cell RNA-seq of mouse kidneys undergoing ferroptosis

Project description:We performed single-cell transcriptomics analyses (10x Chromium 3' v3.1) using dissociated total kidney cells to identify the difference in gene expression patterns and signaling pathways between male and female mouse kidneys after selective induction of ferroptotic stress in renal tubular epithelial cells.

2022-10-27 | GSE197528 | GEO

Single cell RNA-Seq of sorted nephron progenitor cells from pooled mouse kidneys

Project description:Single cell RNA-Seq of sorted nephron progenitor cells from pooled mouse kidneys

| PRJNA540758 | ENA

Single Cell Chromatin Accessibility Profiling on the mouse kidneys with ischemia-reperfusion injury

Project description:We performed single nucleus ATAC (snATAC-seq) to generate cell-type-specific chromatin accessibility atlas of the mouse kidneys with ischemia-reperfusion injury. The single nucleus RNA-seq of the same samples were previously published (GEO139107)

2024-07-31 | GSE252105 | GEO

Single cell RNA-Seq of sorted nephron progenitor cells from pooled mouse kidneys

Project description:Kidneys from multiple litters of Six2GFP+ E14.5 mouse embryos were pooled into three replicate tubes and dissociated in parallel. Six2GFP+ cells were isolated and processed for single cell sequencing using 10x Genomics technology. This resulted in a dataset of 7844 single cells representing the nephron progenitor population of the mouse kidney.

2019-05-30 | GSE130606 | GEO

Single-cell RNA-seq in mouse kidneys after IRI

Project description:We performed Drop-seq using dissociated total kidney cells to identify cell types, gene expression patterns and signaling pathways in mouse kidneys after IRI.

2021-07-21 | GSE161201 | GEO

Single cell RNA sequencing of mouse macrophage

Project description:Single cell RNA sequencing of mouse macrophage

| PRJEB53583 | ENA

Single-cell RNA sequencing of murine kidneys for ischemia-reperfusion induced renal injury and fibrosis

Project description:Using single-cell RNA sequencing (scRNA-seq), we isolated approximately 100,000 cells from mouse kidneys and generated a large-scale transcriptomic dataset corresponding to time points of 4 hours, 12 hours, 1 day, 5 days, 14 days, and 28 days after IR. Our preliminary analysis identified 16 distinct cell types, providing a robust database to study the changes and evolution of renal IRI from early to late stages.

2024-08-31 | GSE274819 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data