Dataset Information

Bacteria; Tenericutes; Mollicutes; Mycoplasmataceae; Mycoplasma.

ABSTRACT: Bacteria; Tenericutes; Mollicutes; Mycoplasmataceae; Mycoplasma. Genome sequencing and assembly

PROVIDER: PRJNA668855 | ENA |

REPOSITORIES: ENA

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Dataset's files

Source:

			Action	DRS
	SRR13636541.fastq.gz	Fastqsanger.gz
	SRR13616361.fastq.gz	Fastqsanger.gz
	SRR13616686.fastq.gz	Fastqsanger.gz
	SRR13626389.fastq.gz	Fastqsanger.gz
	SRR13624992.fastq.gz	Fastqsanger.gz

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Project description:Minimal standards for novel species of the class Mollicutes (trivial term, mollicutes), last published in 1995, require revision. The International Committee on Systematics of Prokaryotes Subcommittee on the Taxonomy of Mollicutes proposes herein revised standards that reflect recent advances in molecular systematics and the species concept for prokaryotes. The mandatory requirements are: (i) deposition of the type strain into two recognized culture collections, preferably located in different countries; (ii) deposition of the 16S rRNA gene sequence into a public database, and a phylogenetic analysis of the relationships among the 16S rRNA gene sequences of the novel species and its neighbours; (iii) deposition of antiserum against the type strain into a recognized collection; (iv) demonstration, by using the combination of 16S rRNA gene sequence analyses, serological analyses and supplementary phenotypic data, that the type strain differs significantly from all previously named species; and (v) assignment to an order, a family and a genus in the class, with an appropriate specific epithet. The 16S rRNA gene sequence provides the primary basis for assignment to hierarchical rank, and may also constitute evidence of species novelty, but serological and supplementary phenotypic data must be presented to substantiate this. Serological methods have been documented to be congruent with DNA-DNA hybridization data and with 16S rRNA gene placements. The novel species must be tested serologically to the greatest extent that the investigators deem feasible against all neighbouring species whose 16S rRNA gene sequences show >0.94 similarity. The investigator is responsible for justifying which characters are most meaningful for assignment to the part of the mollicute phylogenetic tree in which a novel species is located, and for providing the means by which novel species can be identified by other investigators. The publication of the description should appear in a journal having wide circulation. If the journal is not the International Journal of Systematic and Evolutionary Microbiology, copies of the publication must be submitted to that journal so that the name may be considered for inclusion in a Validation List as required by the International Code of Bacteriological Nomenclature (the Bacteriological Code). Updated informal descriptions of the class Mollicutes and some of its constituent higher taxa are available as supplementary material in IJSEM Online.

Dataset Information

Bacteria; Tenericutes; Mollicutes; Mycoplasmataceae; Mycoplasma.

Dataset's files

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