Project description:To explore the mechanism underlying the phenotypic and genetic changes in the variants of SCSIO 43097, we conducted an RNA-seq analysis of the wild-type strain and the variants.

2022-06-20 | GSE206001 | GEO

Transcriptome analysis of planktonic, initial pellicle, and mature pellicle of Pseudoalteromonas sp. SCSIO 11900

Project description:One of the most distinct features of Pseudoalteromonas sp. SCSIO 11900 is its ability to form a very robust pellicle than most Pseudoalteromonas strains. Thus we want to identify the genes essential for the pellicle formation of SCSIO 11900. We compared transcriptom profiles of planktonic cells, initial pellicle and mature pellicle of coral Pseudoalteromonas sp. SCSIO 11900 and revealed that some unique genes from horizontal gene transfer is involved in the pellicle formation of SCSIO 11900.

2017-04-04 | GSE97322 | GEO

Rubrobacter tropicus strain:SCSIO 52909

Project description:Rubrobacter tropicus strain:SCSIO 52909 Genome sequencing

| PRJNA577049 | ENA

Rubrobacter marinus strain:SCSIO 52915

Project description:Rubrobacter marinus strain:SCSIO 52915 Genome sequencing

| PRJNA577050 | ENA

Streptomyces marincola strain:SCSIO 64649

Project description:Streptomyces marincola strain:SCSIO 64649 Genome sequencing

| PRJNA765940 | ENA

Streptomyces koyangensis strain:SCSIO 5802

Project description:Streptomyces koyangensis strain:SCSIO 5802 Genome sequencing

| PRJNA604304 | ENA

Streptomyces olivaceus strain:SCSIO T05

Project description:Streptomyces olivaceus strain:SCSIO T05 Genome sequencing

| PRJNA561678 | ENA

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data