Project description:Monitoring microbial communities can aid in understanding the state of these habitats. Environmental DNA (eDNA) techniques provide efficient and comprehensive monitoring by capturing broader diversity. Besides structural profiling, eDNA methods allow the study of functional profiles, encompassing the genes within the microbial community. In this study, three methodologies were compared for functional profiling of microbial communities in estuarine and coastal sites in the Bay of Biscay. The methodologies included inference from 16S metabarcoding data using Tax4Fun, GeoChip microarrays, and shotgun metagenomics.
Project description:Marine fish eDNA metabarcoding
| PRJNA802546 | ENA
Project description:eDNA metabarcoding as a tool for estuary monitoring
| PRJNA627491 | ENA
Project description:Coral and water microbiomes from marine protected areas and fished areas
| PRJNA476581 | ENA
Project description:eDNA metabarcoding for biomonitoring of fish biodiversity after a dam construction
| PRJNA496021 | ENA
Project description:Robustness, sensitivity and reproducibility of eDNA metabarcoding as an environmental biomonitoring tool in coastal salmon aquaculture - an inter-laboratory study
| PRJNA647362 | ENA
Project description:Sediment preservation for eDNA biomonitoring
