Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Chiloscyllium griseum

ABSTRACT: Chiloscyllium griseum Transcriptome or Gene expression

PROVIDER: PRJNA688989 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR15990417_1.fastq.gz	Fastqsanger.gz
	SRR15990417_2.fastq.gz	Fastqsanger.gz

Items per page:

1 - 2 of 2

Similar Datasets

Chiloscyllium griseum

Project description:Chiloscyllium griseum overview

| PRJNA165079 | ENA

Chiloscyllium punctatum

Project description:Chiloscyllium punctatum overview

| PRJNA81493 | ENA

Chiloscyllium plagiosum

Project description:Chiloscyllium plagiosum overview

| PRJNA341291 | ENA

Chiloscyllium plagiosum

Project description:Chiloscyllium plagiosum Genome sequencing and assembly

| PRJNA477737 | ENA

Chiloscyllium plagiosum

Project description:microRNA expression profiling of the normal and regenerating liver of Chiloscyllium plagiosum

| PRJNA293794 | ENA

Transcriptome profiling in Chiloscyllium griseum

Project description:Transcriptome profiling reveals higher vertebrate orthologous of intra-cytoplasmic pattern recognition receptors in grey bamboo shark

| PRJEB4999 | ENA

Chiloscyllium plagiosum isolate:BGI_BamShark_2017

Project description:Chiloscyllium plagiosum isolate:BGI_BamShark_2017 Genome sequencing and assembly

| PRJNA478295 | ENA

Transcriptome profiling from spleen and kidney of grey bamboo shark (Chiloscyllium griseum)

Project description:Transcriptome profiling reveals the existence of orthologous of mammalian of intra-cytoplasmic pattern recognition receptors in grey bamboo shark (Chiloscyllium griseum)

| PRJEB4800 | ENA

circRNA-sequencing of Chiloscyllium plagiosum liver

Project description:circRNA-sequencing of Chiloscyllium plagiosum liver

| PRJNA660343 | ENA

Antigen Specific VNAR Screening in Whitespotted Bamboo Shark (Chiloscyllium plagiosum) with Next Generation Sequencing

Project description:IgNAR exhibits significant promise in the fields of cancer and anti-virus biotherapies. Notably, the variable regions of IgNAR (VNAR) possess comparable antigen binding affinity with much smaller molecular weight (~12 kDa) compared to IgNAR. Antigen specific VNAR screening is a changeling work, which limits its application in medicine and therapy fields. Though phage display is a powerful tool for VNAR screening, it has a lot of drawbacks, such as small library coverage, low expression levels, unstable target protein, complicating and time-consuming procedures. Here we report VNAR screening with next generation sequencing (NGS) could effectively overcome the limitations of phage display, and we successfully identified approximately 3000 BAFF-specific VNARs in Chiloscyllium plagiosum vaccinated with the BAFF antigen. The results of modelling and molecular dynamics simulation and ELISA assay demonstrated that one out of the top five abundant specific VNARs exhibited higher binding affinity to the BAFF antigen than those obtained through phage display screening. Our data indicates NGS would be an alternative way for VNAR screening with plenty of advantages.

2024-01-01 | GSE249557 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data