Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Heterorhabditis bacteriophora transcriptome

PROVIDER: PRJNA720314 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR14162364_1.fastq.gz	Fastqsanger.gz
	SRR14162364_2.fastq.gz	Fastqsanger.gz
	SRR14162365_1.fastq.gz	Fastqsanger.gz
	SRR14162365_2.fastq.gz	Fastqsanger.gz
	SRR14162366_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 12

Similar Datasets

heterorhabditis bacteriophora

Project description:heterorhabditis bacteriophora

| PRJEB40755 | ENA

Heterorhabditis bacteriophora

Project description:Heterorhabditis bacteriophora

| PRJNA20357 | ENA

RNA-Sequencing analysis of the Drosophila transcriptomic response to infection by entomopathogenic nematodes and their mutualistic bacteria

Project description:We report the application of next generation RNA sequencing to analyze the transcriptional response of Drosophila adult flies to infection by the insect pathogenic nematodes Heterorhabditis bacteriophora and their mutualistic bacteria Photorhabdus luminescens, either separately or together. We find that Heterorhabditis and Photorhabdus differentially modulate a large number of genes, many of which participate in metabolic functions, stress responses, repression of gene transcription and neuronal activities. We have also identified Drosophila genes with potential role in nematode recognition and others with putative anti-nematode properties. These findings generate novel insights into how the host immune function is shaped to respond against nematode parasites and their associated bacteria. Transcriptional profiles of Drosophila wild-type adult flies infected with Heterorhabditis bacteriophora carrying or lacking Photorhabdus or the bacteria alone were generated at 12 and 30 hours post infection using Illumina deep sequencing technology.

2015-09-12 | E-GEOD-61466 | biostudies-arrayexpress

RNA-Sequencing analysis of the Drosophila transcriptomic response to infection by entomopathogenic nematodes and their mutualistic bacteria

2015-09-12 | GSE61466 | GEO

Heterorhabditis bacteriophora

Project description:Heterorhabditis bacteriophora Transcriptome or Gene expression

| PRJNA525361 | ENA

Heterorhabditis bacteriophora

Project description:Heterorhabditis bacteriophora Raw sequence reads

| PRJNA607179 | ENA

Project description:Genome sequencing of Heterorhabditis bacteriophora

| PRJNA438576 | ENA

Heterorhabditis bacteriophora isolate:Not applicable

Project description:Heterorhabditis bacteriophora isolate:Not applicable Genome sequencing

| PRJNA562436 | ENA

The Drosophila immune response towards entomopathogenic nematodes and their associated bacteria.

Project description:Entomopathogenic nematodes (EPNs) of the genera Heterorhabditis are obligate and lethal insect parasites. In recent years they have been used increasingly as biological control agents. These EPNs are symbiotically associated with bacteria of the genera Photorhabdus. The bacterial symbionts are essential to kill the host (within 24-48 hours) and digest its tissues to provide nutrients for themselves as well for expanding nematodes. Drosophila larvae are suitable insect hosts and part of the tripartite model system we used before to show the importance of haemolymph clotting and eicosanoids during the infection. We used the well-established tripartite model (Drosophila, nematodes, bacteria), DNA chips and bioinformatic tools to compare gene expression in non-infected and infected fly larvae. We focused on the early time point of nematode infection and therefore infected Drosophila larvae using H. bacteriophora harbouring GFP-labelled P. luminescens bacteria. Infected (GFP positive) larvae were collected 6 hours after infection.

2014-03-07 | E-MTAB-1542 | biostudies-arrayexpress

Heterorhabditis bacteriophora isolate:NBAII Hb105

Project description:Mitochondrial DNA genome assembly of Heterorhabditis bacteriophora NBAII Hb105 local isolate

| PRJNA380600 | ENA