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Streptomyces chartreusis

ABSTRACT: Streptomyces chartreusis overview

PROVIDER: PRJNA72811 | ENA |

REPOSITORIES: ENA

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Dataset's files

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			Action	DRS
		Other
	AGDD01.dat.gz	Other
	AGDD01.fasta.gz	Fasta.gz
	AGDD01.master.dat	Other
	AGDE01.dat.gz	Other

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Genome-wide binding site profiling of NdgR in Streptomyces coelicolor

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The secreted metabolome of Streptomyces chartreusis and implications for bacterial chemistry.

Project description:Actinomycetes are known for producing diverse secondary metabolites. Combining genomics with untargeted data-dependent tandem MS and molecular networking, we characterized the secreted metabolome of the tunicamycin producer Streptomyces chartreusis NRRL 3882. The genome harbors 128 predicted biosynthetic gene clusters. We detected >1,000 distinct secreted metabolites in culture supernatants, only 22 of which were identified based on standards and public spectral libraries. S. chartreusis adapts the secreted metabolome to cultivation conditions. A number of metabolites are produced iron dependently, among them 17 desferrioxamine siderophores aiding in iron acquisition. Eight previously unknown members of this long-known compound class are described. A single desferrioxamine synthesis gene cluster was detected in the genome, yet different sets of desferrioxamines are produced in different media. Additionally, a polyether ionophore, differentially produced by the calcimycin biosynthesis cluster, was discovered. This illustrates that metabolite output of a single biosynthetic machine can be exquisitely regulated not only with regard to product quantity but also with regard to product range. Compared with chemically defined medium, in complex medium, total metabolite abundance was higher, structural diversity greater, and the average molecular weight almost doubled. Tunicamycins, for example, were only produced in complex medium. Extrapolating from this study, we anticipate that the larger part of bacterial chemistry, including chemical structures, ecological functions, and pharmacological potential, is yet to be uncovered.

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Halogenated volatiles from the fungus Geniculosporium and the actinomycete Streptomyces chartreusis.

Project description:Two unidentified chlorinated volatiles X and Y were detected in headspace extracts of the fungus Geniculosporium. Their mass spectra pointed to the structures of a chlorodimethoxybenzene for X and a dichlorodimethoxybenzene for Y. The mass spectra of some constitutional isomers for X and Y were included in our databases and proved to be very similar, thus preventing a full structural assignment. For unambiguous structure elucidation all possible constitutional isomers for X and Y were obtained by synthesis or from commercial suppliers. Comparison of mass spectra and GC retention times rigorously established the structures of the two chlorinated volatiles. Chlorinated volatiles are not very widespread, but brominated or even iodinated volatiles are even more rare. Surprisingly, headspace extracts from Streptomyces chartreusis contained methyl 2-iodobenzoate, a new natural product that adds to the small family of iodinated natural products.

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GNPS - Influence of amino acid feeding on production of calcimycin and analogs in Streptomyces chartreusis

Project description:Streptomyces chartreusis feeding experiments with all proteinogenic amino acids in minimal medium. Analysis of the calcimycin and analogs production in the culture supernatant by LC-MS/MS. RAW Files were used to generate Figures 1 and 2.

2021-05-03 | MSV000087354 | GNPS

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