Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Complete chloroplast genome of a Chinese endemic species Corydalis heracleifolia (Papaveraceae)

PROVIDER: PRJNA756963 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR15672852_1.fastq.gz	Fastqsanger.gz
	SRR15672852_2.fastq.gz	Fastqsanger.gz

Items per page:

1 - 2 of 2

Similar Datasets

Project description:The complete chloroplast genome of Chinese medicine species Bupleurum smithii (Umbelliferae)

| PRJNA738858 | ENA

Crocus olivieri subsp. istanbulensis

Project description:Complete chloroplast genome sequence of endemic Crocus istanbulensis

| PRJNA599306 | ENA

Project description:Complete chloroplast genome of Paraphlomis koreana (Lamiaceae), an endemic species from South Korea

| PRJNA778560 | ENA

Chloroplast-genome-wide maps of small RNAs in Chinese cabbage (Brassica rapa) and Arabidopsis thaliana (Ler).

Project description:Deep sequencing provided evidence that a novel subset of small RNAs were derived from the chloroplast genome of Chinese cabbage (Brassica rapa) and Arabidopsis (Ler). The chloroplast small RNAs (csRNAs) include those derived from mRNA, rRNA, tRNA and intergenic RNA. The rRNA-derived csRNA were preferentially located at the 3â-ends of the rRNAs, while the tRNA-derived csRNAs were mainly located at 5â-termini of the tRNAs. After heat treatment, the abundance of csRNAs decreased in chinese cabbage seedlings, except those of 24 nt in length. The novel heat-responsive csRNAs and their locations in the chloroplast were verified by Northern blotting. The regulation of some csRNAs to the putative target genes were identified by real-time PCR. Our results indicated that high temperature regulated the production of some csRNAs, which may have potential roles in transcriptional or post-transcriptional regulation, and affected putative target genes expression in chloroplast.

2012-03-31 | GSE28281 | GEO

Project description:Chloroplast genome of Corydalis yanhusuo

| PRJNA741360 | ENA

Chloroplast-genome-wide maps of small RNAs in Chinese cabbage (Brassica rapa) and Arabidopsis thaliana (Ler).

Project description:Deep sequencing provided evidence that a novel subset of small RNAs were derived from the chloroplast genome of Chinese cabbage (Brassica rapa) and Arabidopsis (Ler). The chloroplast small RNAs (csRNAs) include those derived from mRNA, rRNA, tRNA and intergenic RNA. The rRNA-derived csRNA were preferentially located at the 3M-CM-"M-BM-^@M-BM-^Y-ends of the rRNAs, while the tRNA-derived csRNAs were mainly located at 5M-CM-"M-BM-^@M-BM-^Y-termini of the tRNAs. After heat treatment, the abundance of csRNAs decreased in chinese cabbage seedlings, except those of 24 nt in length. The novel heat-responsive csRNAs and their locations in the chloroplast were verified by Northern blotting. The regulation of some csRNAs to the putative target genes were identified by real-time PCR. Our results indicated that high temperature regulated the production of some csRNAs, which may have potential roles in transcriptional or post-transcriptional regulation, and affected putative target genes expression in chloroplast. Examination of two replicates of heat treated (HT) and control (MT) Chinese cabbage sample respectively, and one Arabidopsis (Ler) RNA sample.

2012-03-30 | E-GEOD-28281 | biostudies-arrayexpress

Project description:The complete chloroplast genome of Chinese medicine cultivar species of Rehmannia glutinosa (Orobanchaceae)

| PRJNA665347 | ENA

Project description:Characterization of the complete chloroplast genome of a Chinese endangered species Cymbidium lancifolium

| PRJNA788783 | ENA

Project description:Complete chloroplast genome of Mengyin endemic flat peach cultivar Huangyou

| PRJNA763364 | ENA

Project description:Comparative chloroplast genomics of Corydalis

| PRJNA776704 | ENA