Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Bacterial diversity and community structure in the rhizosphere of Lantana camara L.

PROVIDER: PRJNA857161 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR20067578.fastq.gz	Fastqsanger.gz

Items per page:

1 - 1 of 1

Similar Datasets

Lantana camara

Project description:Lantana camara overview

| PRJNA587191 | ENA

Lantana camara

Project description:Lantana camara Transcriptome Assembly

| PRJNA556103 | ENA

Lantana camara

Project description:Lantana camara Raw sequence reads

| PRJNA501911 | ENA

Vitis vinifera rhizosphere characterization: a metaproteome approach

Project description:Rhizosphere is a complex system of interactions between plant roots, bacteria, fungi and animals, where the release of plant root exudates stimulates bacterial density and diversity. However, the majority of the bacteria in soil results to be unculturable but active. The aim of the present work was to characterize the microbial community associated to the root of V. vinifera cv. Pinot Noir not only under a taxonomic perspective, but also under a functional point of view, using a metaproteome approach. Our results underlined the difference between the metagenomic and metaproteomic approach and the large potentiality of proteomics in describing the environmental bacterial community and its activity. In fact, by this approach, that allows to investigate the mechanisms occurring in the rhizosphere, we showed that bacteria belonging to Streptomyces, Bacillus and Pseudomonas genera are the most active in protein expression. In the rhizosphere, the identified genera were involved mainly in phosphorus and nitrogen soil metabolism.

2022-02-28 | PXD007670 | Pride

Structure and variation in microbiome from continuous and rotational Pinellia ternata cropping soils

Project description:We used wheat as rotational crop to assess the influence of continuous cropping on microbiome in Pinellia ternata rhizosphere and the remediation of rotational cropping to the impacted microbiota. Illumina high-throughput sequencing technology was utilized for this method to explore the rhizosphere microbial structure and diversity based on continuous and rotational cropping.

2016-12-10 | GSE91083 | GEO

GeoChip data of soil microbial communities in the maize rhizosphere and bulk soils

Project description:Microbial communities in the rhizosphere make significant contributions to crop health and nutrient cycling. However, their ability to perform important biogeochemical processes remains uncharacterized. Important functional genes, which characterize the rhizosphere microbial community, were identified to understand metabolic capabilities in the maize rhizosphere using GeoChip 3.0-based functional gene array method.

2014-09-12 | GSE61338 | GEO

Soybean root sample

Project description:Soybean rhizosphere bacterial community diversity

| PRJNA478486 | ENA

Bacterial community structure in Turmeric rhizosphere

Project description:Bacterial community structure in Turmeric rhizosphere Metagenome

| PRJNA659126 | ENA

Project description:Bacterial community structure in maize rhizosphere soil

| PRJNA656634 | ENA

Project description:Bacterial community structure of GM cotton rhizosphere

| PRJNA391400 | ENA