TMT spikes - Using R and Bioconductor for proteomics data analysis
Ontology highlight
ABSTRACT:
INSTRUMENT(S): LTQ Orbitrap Velos, instrument model
ORGANISM(S): Erwinia Carotovora
SUBMITTER: 
Laurent Gatto
PROVIDER: PXD000001 | Pride | 2012-03-07
REPOSITORIES: Pride
Publications
Using R and Bioconductor for proteomics data analysis.
Gatto Laurent L Christoforou Andy A
Biochimica et biophysica acta 20130518 1 Pt A
This review presents how R, the popular statistical environment and programming language, can be used in the frame of proteomics data analysis. A short introduction to R is given, with special emphasis on some of the features that make R and its add-on packages premium software for sound and reproducible data analysis. The reader is also advised on how to find relevant R software for proteomics. Several use cases are then presented, illustrating data input/output, quality control, quantitative p ...[more]
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