Proteomics

Dataset Information

0

Toxoplsama Gondii whole proteome study


ABSTRACT: MS/MS dataset for proteogenomics study of Toxoplasma gondii. The dataset was searched against the official v9 gene model from ToxoDB, and the alternate panels of proteins predicted from RNA-SEQ evidences.

INSTRUMENT(S): LTQ Orbitrap

ORGANISM(S): Toxoplasma Gondii Rh

SUBMITTER: Ritesh Krishna  

LAB HEAD: Andrew Jones

PROVIDER: PXD000297 | Pride | 2015-02-09

REPOSITORIES: Pride

Dataset's files

Source:
Action DRS
1DE_1-1D.raw Raw
1DE_10-1D.raw Raw
1DE_100-1D.raw Raw
1DE_101-1D.raw Raw
1DE_102-1D.raw Raw
Items per page:
1 - 5 of 1121
altmetric image

Publications


Proteomics data can supplement genome annotation efforts, for example being used to confirm gene models or correct gene annotation errors. Here, we present a large-scale proteogenomics study of two important apicomplexan pathogens: Toxoplasma gondii and Neospora caninum. We queried proteomics data against a panel of official and alternate gene models generated directly from RNASeq data, using several newly generated and some previously published MS datasets for this meta-analysis. We identified  ...[more]

Similar Datasets

2020-05-27 | PXD015031 | Pride
2024-04-27 | PXD044725 | Pride
2019-11-14 | PXD007777 | Pride
2014-10-20 | PXD001042 | Pride
2024-10-09 | E-MTAB-14453 | biostudies-arrayexpress
2012-01-11 | E-GEOD-26608 | biostudies-arrayexpress
2021-05-10 | PXD021736 | Pride
2014-09-27 | E-GEOD-61806 | biostudies-arrayexpress
2024-01-26 | PXD046083 | Pride
2020-12-01 | E-MTAB-9105 | biostudies-arrayexpress