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Transcriptome and Proteomic Analysis of Mango (Mangifera indica Linn) Fruits

ABSTRACT: Transcriptome and Proteomic Analysis of Mango (Mangifera indica Linn) Fruits

OTHER RELATED OMICS DATASETS IN: PRJNA235247

INSTRUMENT(S): LTQ Orbitrap Velos

ORGANISM(S): Mangifera Indica (mango)

TISSUE(S): Fruit Body

SUBMITTER: Hongxia Wu

LAB HEAD: Hongxia Wu

PROVIDER: PXD000808 | Pride | 2015-02-20

REPOSITORIES: Pride

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			Action	DRS
	mango-peak.zip	Other
	mango-raw.zip	Other
	mango_results-pride.pride.mgf.gz	Mgf
	mango_results-pride.pride.mztab.gz	Mztab
	mango_results-pride.xml.gz	Xml

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Publications

Transcriptome and proteomic analysis of mango (Mangifera indica Linn) fruits.

Wu Hong-xia HX Jia Hui-min HM Ma Xiao-wei XW Wang Song-biao SB Yao Quan-sheng QS Xu Wen-tian WT Zhou Yi-gang YG Gao Zhong-shan ZS Zhan Ru-lin RL

Journal of proteomics 20140403

Here we used Illumina RNA-seq technology for transcriptome sequencing of a mixed fruit sample from 'Zill' mango (Mangifera indica Linn) fruit pericarp and pulp during the development and ripening stages. RNA-seq generated 68,419,722 sequence reads that were assembled into 54,207 transcripts with a mean length of 858bp, including 26,413 clusters and 27,794 singletons. A total of 42,515(78.43%) transcripts were annotated using public protein databases, with a cut-off E-value above 10(-5), of which ...[more]

PMID: 24704857

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Transcriptional profiling of Piriformospora indica colonizing living and dead barley roots

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Testing TMT-SPS-MS3 and label free approach in recalcitrant Mago (Mangifera indica L.) peel tissues

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