Proteomics

Dataset Information

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ITRAQ proteomics of non fibrotic carcinoma on Human Liver


ABSTRACT: We present a study of hepatocellular carcinoma developed on non-fibrotic liver (nfHCC) that combines complementary quantitative iTRAQ-based proteomics and phosphoproteomics approaches. Using both approaches, we analyzed a set of 24 samples (18 nfHCC vs 6 non-tumor liver tissue).

INSTRUMENT(S): LTQ Orbitrap

ORGANISM(S): Homo Sapiens (human)

TISSUE(S): Liver

DISEASE(S): Hepatocellular Carcinoma

SUBMITTER: Luc NEGRONI  

LAB HEAD: Eric Chevet

PROVIDER: PXD001253 | Pride | 2014-09-18

REPOSITORIES: Pride

Dataset's files

Source:
Action DRS
CHC120921_E1.RAW Raw
CHC120921_E1.msf Msf
CHC120921_E1.pep.xml Pepxml
CHC120921_E1.prot.xml Xml
CHC120921_E2.RAW Raw
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Publications

Integrative quantitative proteomics unveils proteostasis imbalance in human hepatocellular carcinoma developed on nonfibrotic livers.

Negroni Luc L   Taouji Said S   Arma Daniela D   Pallares-Lupon Nestor N   Leong Kristen K   Beausang Lee Anne LA   Latterich Martin M   Bossé Roger R   Balabaud Charles C   Schmitter Jean-Marie JM   Bioulac-Sage Paulette P   Zucman-Rossi Jessica J   Rosenbaum Jean J   Chevet Eric E  

Molecular & cellular proteomics : MCP 20140915 12


Proteomics-based clinical studies represent promising resources for the discovery of novel biomarkers or for unraveling molecular mechanisms underlying particular diseases. Here, we present a discovery study of hepatocellular carcinoma developed on nonfibrotic liver (nfHCC) that combines complementary quantitative iTRAQ-based proteomics and phosphoproteomics approaches. Using both approaches, we compared a set of 24 samples (18 nfHCC versus six nontumor liver tissue). We identified 43 proteins (  ...[more]

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