Proteomics

Dataset Information

0

Comprehensive Assessment of Proteins Regulated by Dexamethasone Reveals Novel Effects in Primary Human Peripheral Blood Mononuclear Cells - cytoplasmic proteins of dexamethasone-treated inflammatory stimulated cells


ABSTRACT: Inflammation is a physiological process involved in many diseases. Monitoring proteins involved in regulatory effects may help to improve our understanding of inflammation. We have analyzed proteome alterations induced in peripheral blood mononuclear cells (PBMCs) upon inflammatory activation in great detail using high resolution mass spectrometry. Moreover, the activated cells were treated with dexamethasone to investigate their response to this antiphlogistic drug. From a total of 6886 identified proteins, 469 proteins were significantly regulated upon inflammatory activation. Most of these proteins were counter-regulated by dexamethasone, with some exceptions concerning members of the interferon-induced protein family. To confirm some of these results, we performed targeted MRM analyses of selected peptides. The inflammation-induced up-regulation of proteins such as IL-1beta, IL-6, CXCL2 and GROα was confirmed, however with strong quantitative inter-individual differences. Furthermore, the inability of dexamethasone to down-regulate inflammation-induced proteins such as PTX3 and TSG6 was clearly demonstrated. In conclusion, the relation of cell function as well as drug-induced modulation thereof was successfully mapped to proteomes, suggesting targeted analysis as a novel and powerful drug evaluation method. While most consequences of dexamethasone were found compatible with the expected way of action, some unexpected but significant observations may relate with adverse effects.

INSTRUMENT(S): Q Exactive

ORGANISM(S): Homo Sapiens (human)

TISSUE(S): Peripheral Blood Mononuclear Cell, Blood

SUBMITTER: Christopher Gerner  

LAB HEAD: Christopher Gerner

PROVIDER: PXD001422 | Pride | 2014-11-04

REPOSITORIES: Pride

Dataset's files

Source:
Action DRS
PBMC_1_stim_dex_cyt1-4.mgf Mgf
PBMC_1_stim_dex_cyt1-4.mzid.gz Mzid
PBMC_1_stim_dex_cyt1-4.pride.mgf.gz Mgf
PBMC_1_stim_dex_cyt1-4.pride.mztab.gz Mztab
PBMC_1_stim_dex_cyt1a.raw Raw
Items per page:
1 - 5 of 48
altmetric image

Publications

Comprehensive assessment of proteins regulated by dexamethasone reveals novel effects in primary human peripheral blood mononuclear cells.

Bileck Andrea A   Kreutz Dominique D   Muqaku Besnik B   Slany Astrid A   Gerner Christopher C  

Journal of proteome research 20141105 12


Inflammation is a physiological process involved in many diseases. Monitoring proteins involved in regulatory effects may help to improve our understanding of inflammation. We have analyzed proteome alterations induced in peripheral blood mononuclear cells (PBMCs) upon inflammatory activation in great detail using high-resolution mass spectrometry. Moreover, the activated cells were treated with dexamethasone to investigate their response to this antiphlogistic drug. From a total of 6886 identif  ...[more]

Similar Datasets

2014-11-04 | PXD001421 | Pride
2014-11-04 | PXD001423 | Pride
2014-11-04 | PXD001419 | Pride
2014-11-04 | PXD001416 | Pride
2014-11-04 | PXD001418 | Pride
2014-11-04 | PXD001415 | Pride
2014-11-04 | PXD001420 | Pride
2014-11-04 | PXD001417 | Pride
2017-02-22 | PXD003971 | Pride
2017-02-22 | PXD003966 | Pride