Proteomics

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Metaproteomics analyses of three chronically petroleum-polluted sites


ABSTRACT: Crude oil is the one of the most important natural assets of humankind, yet it is a major environmental pollutant, in particular, in marine environments. One of the largest crude oil polluted areas in the word is the semi-enclosed Mediterranean Sea, where the metabolic potential of indigenous populations towards the chronic pollution at a large scale is yet to be defined, particularly in anaerobic and micro-anaerobic marine sites. Here, we provided a novel insight into the active microbial metabolism in sediments from three environments along the coastline of Italy. Microbial proteomes exhibited prevalence in anaerobic metabolism, not related to the biodegradation directly, suggesting the strong limitation by oxygen induced by the carbon overload. They also point at previously unrecognized metabolic coupling between methane and methanol utilizers as well as sulfur reducers in marine petroleum polluted sediments.

INSTRUMENT(S): LTQ Orbitrap Velos

ORGANISM(S): Environmental Samples

SUBMITTER: Florian-Alexander Herbst  

LAB HEAD: Martin von Bergen

PROVIDER: PXD001490 | Pride | 2015-07-24

REPOSITORIES: Pride

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Metaproteomics and metabolomics analyses of chronically petroleum-polluted sites reveal the importance of general anaerobic processes uncoupled with degradation.

Bargiela Rafael R   Herbst Florian-Alexander FA   Martínez-Martínez Mónica M   Seifert Jana J   Rojo David D   Cappello Simone S   Genovese María M   Crisafi Francesca F   Denaro Renata R   Chernikova Tatyana N TN   Barbas Coral C   von Bergen Martin M   Yakimov Michail M MM   Ferrer Manuel M   Golyshin Peter N PN  

Proteomics 20150827 20


Crude oil is one of the most important natural assets for humankind, yet it is a major environmental pollutant, notably in marine environments. One of the largest crude oil polluted areas in the word is the semi-enclosed Mediterranean Sea, in which the metabolic potential of indigenous microbial populations towards the large-scale chronic pollution is yet to be defined, particularly in anaerobic and micro-aerophilic sites. Here, we provide an insight into the microbial metabolism in sediments fr  ...[more]

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