Proteomics

Dataset Information

0

Immunohistochemical markers distinguishing cholangiocellular carcinoma from pancreatic ductal adenocarcinoma discovered by proteomic analysis of microdissected cells


ABSTRACT: Cholangiocellular carcinoma (CCC) and pancreatic ductal adenocarcinoma (PDAC) are two highly aggressive cancer types which arise from epithelial cells of the pancreatobiliary system. Due to their histologic and morphologic similarity, differential diagnosis between CCC and metastasis of PDAC located in the liver frequently proves an unsolvable issue for pathologists. Biomarkers with high specificity and sensitivity for the differentiation of these tumour types would therefore be a valuable tool, but so far none are available. Here, we address this problem by comparing microdissected CCC and PDAC tumour cells in a label-free proteomics approach. The novel biomarker candidates were subsequently verified by immunohistochemical staining of primary and secondary tumour tissue.

INSTRUMENT(S): LTQ Orbitrap Elite

ORGANISM(S): Homo Sapiens (human)

TISSUE(S): Pancreatic Ductal Adenocarcinoma Cell, Cholangiocarcinoma Cell, Epithelial Cell

DISEASE(S): Cholangiocarcinoma,Pancreatic Ductal Adenocarcinoma

SUBMITTER: Juliet Padden  

LAB HEAD: Barbara Sitek

PROVIDER: PXD001833 | Pride | 2015-12-10

REPOSITORIES: Pride

Dataset's files

Source:
Action DRS
02_1PDACOEI12152.raw Raw
02_2PDACOEI12202.raw Raw
02_3PDACOEI12248.raw Raw
03_1CCCOEI12154.raw Raw
03_2CCCOEI12196.raw Raw
Items per page:
1 - 5 of 264
altmetric image

Publications

Immunohistochemical Markers Distinguishing Cholangiocellular Carcinoma (CCC) from Pancreatic Ductal Adenocarcinoma (PDAC) Discovered by Proteomic Analysis of Microdissected Cells.

Padden Juliet J   Ahrens Maike M   Kälsch Julia J   Bertram Stefanie S   Megger Dominik A DA   Bracht Thilo T   Eisenacher Martin M   Kocabayoglu Peri P   Meyer Helmut E HE   Sipos Bence B   Baba Hideo A HA   Sitek Barbara B  

Molecular & cellular proteomics : MCP 20151207 3


Cholangiocellular carcinoma (CCC) and pancreatic ductal adenocarcinoma (PDAC) are two highly aggressive cancer types that arise from epithelial cells of the pancreatobiliary system. Owing to their histological and morphological similarity, differential diagnosis between CCC and metastasis of PDAC located in the liver frequently proves an unsolvable issue for pathologists. The detection of biomarkers with high specificity and sensitivity for the differentiation of these tumor types would therefor  ...[more]

Similar Datasets

2009-04-22 | E-GEOD-15758 | biostudies-arrayexpress
2010-07-30 | E-GEOD-22482 | biostudies-arrayexpress
2007-09-18 | E-GEOD-1994 | biostudies-arrayexpress
2016-09-08 | E-GEOD-55209 | biostudies-arrayexpress
2021-09-08 | PXD011289 | Pride
2021-02-05 | MSV000086812 | MassIVE
2024-08-19 | PXD048644 | Pride
2017-05-03 | PXD004476 | Pride
2014-12-31 | E-GEOD-27890 | biostudies-arrayexpress
2009-06-02 | E-GEOD-15299 | biostudies-arrayexpress