Proteomics

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Protein Profile Changes in the Frontotemporal Lobes in Human Severe Traumatic Brain Injury


ABSTRACT: Severe traumatic brain injury (sTBI) is a serious public health issue with high morbidity and mortality rates. Previous proteomic studies on sTBI have mainly focused on human cerebrospinal fluid and serum, as well as on brain protein changes in murine models. However, human proteomic data in sTBI brain is still needed. We used proteomics and bioinformatics strategies to investigate variations in protein expression in human brains after sTBI, using samples from the Department of Neurosurgery, Affiliated Hospital of Hebei University (Hebei, P.R. China). Our proteomics data identified 4031 proteins, of which 162 proteins were overexpressed and 5 proteins were downregulated. The biological pathways that showed significant changes in protein expression according to bioinformatics analysis were glial cell differentiation, complement activation, apolipoprotein catalysis in statin pathway, and the blood coagulation cascade. Western blot verification of protein changes in a subset of the available tissue samples showed results that were consistent with the proteomics data. This study is one of the first to investigate the whole proteome of human sTBI brains, and provides a characteristic signature and overall landscape of the sTBI brain proteome.

INSTRUMENT(S): Q Exactive

ORGANISM(S): Homo Sapiens (human)

TISSUE(S): Brain

SUBMITTER: Wei Ge  

LAB HEAD: Wei Ge

PROVIDER: PXD002783 | Pride | 2016-04-15

REPOSITORIES: Pride

Dataset's files

Source:
Action DRS
20141201HUMAN.fasta Fasta
MS141222-1.raw Raw
MS141222-10.raw Raw
MS141222-11.raw Raw
MS141222-12.raw Raw
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Publications

Protein profile changes in the frontotemporal lobes in human severe traumatic brain injury.

Xu Benhong B   Tian Rui R   Wang Xia X   Zhan Shaohua S   Wang Renzhi R   Guo Yi Y   Ge Wei W  

Brain research 20160408


Severe traumatic brain injury (sTBI) is a serious public health issue with high morbidity and mortality rates. Previous proteomic studies on sTBI have mainly focused on human cerebrospinal fluid and serum, as well as on brain protein changes in murine models. However, human proteomic data in sTBI brain is still scarce. We used proteomic and bioinformatic strategies to investigate variations in protein expression levels in human brains after sTBI, using samples from the Department of Neurosurgery  ...[more]

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