Proteomics,Multiomics

Dataset Information

0

Distinct Combinatorial Cascade of Events Generated by ECM Proteolysis Dictates Cell Behavior


ABSTRACT: It is well established that the expression profiles of multiple and possibly redundant matrix remodeling proteases (e.g. collagenases) strongly differentiates in disease and development. Although enzymatic redundancy might be inferred from their close similarity in structure, their in-vivo activity can lead to extremely diverse tissue-remodeling outcomes. We observed that proteolysis of collagen, generated uniquely by individual homologous proteases, leads to a specific cascade of combinatorial events, which eventually affects overall extracellular matrix (ECM) topography, visco-elastic properties and composition. We reveal striking differences in the migratory and signaling patterns, morphology, and gene expression profiles of cells interacting with native collagen-rich ECM matrix degraded by different collagenases. Thus unlike envisioned before degradative matrix remodeling systems are not redundant and give rise to precise ECM-cell crosstalk. As ECM proteolysis is an abundant biochemical process critical to tissue homeostasis these results improve our fundamental understanding of systemic factors dictating cell behavior.

OTHER RELATED OMICS DATASETS IN: PRJNA316930

INSTRUMENT(S): Synapt MS

ORGANISM(S): Rattus Norvegicus (rat)

TISSUE(S): Tail

SUBMITTER: Yishai Levin  

LAB HEAD: Irit Sagi

PROVIDER: PXD003553 | Pride | 2016-09-27

REPOSITORIES: Pride

Dataset's files

Source:
Action DRS
G2_041011_IS_mix1_01.pkl Other
G2_041011_IS_mix1_01.raw.zip Raw
G2_041011_IS_mix1_01_IA_final_peptide.csv Csv
G2_041011_IS_mix1_01_IA_final_protein.csv Csv
G2_041011_IS_mix1_02.pkl Other
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Publications

Distinct biological events generated by ECM proteolysis by two homologous collagenases.

Solomonov Inna I   Zehorai Eldar E   Talmi-Frank Dalit D   Wolf Sharon G SG   Shainskaya Alla A   Zhuravlev Alina A   Kartvelishvily Elena E   Visse Robert R   Levin Yishai Y   Kampf Nir N   Jaitin Diego Adhemar DA   David Eyal E   Amit Ido I   Nagase Hideaki H   Sagi Irit I  

Proceedings of the National Academy of Sciences of the United States of America 20160914 39


It is well established that the expression profiles of multiple and possibly redundant matrix-remodeling proteases (e.g., collagenases) differ strongly in health, disease, and development. Although enzymatic redundancy might be inferred from their close similarity in structure, their in vivo activity can lead to extremely diverse tissue-remodeling outcomes. We observed that proteolysis of collagen-rich natural extracellular matrix (ECM), performed uniquely by individual homologous proteases, lea  ...[more]

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