Proteomics

Dataset Information

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Analysis of isolated Plastoglobules from Arabidopsis thaliana WT and M48 null mutants.


ABSTRACT: We studied the function of PG localized protease, PGM48 both in vitro and in vivo during natural senescence in Arabidopsis thaliana.Our results show that PGM48 is a metalloprotease and a senescence inducible protein. In vitro assay by recombinant protein revealed a proteolytic activity. Quantitative proteome analysis of PGs from senescing rosettes of overexpression plants lines showed a significantly reduced level of CAROTENOID CLEAVAGE ENZYME 4 ( CCD4) protein but 2-3 fold higher level of phytyl-esterase (PES1) compared to wild type; the opposite results were found in RNAi lines. Yeast-2-hybrid analysis and in vitro pull-down experiments showed that PGM48 interacts with the kinase ABC1K3, PES1 and CCD4, but not with chlorophyll catabolic enzymes. We propose that PGM48 acts as a positive regulator of leaf senescence.

INSTRUMENT(S): LTQ Orbitrap

ORGANISM(S): Arabidopsis Thaliana (mouse-ear Cress)

TISSUE(S): Plant Cell, Leaf

SUBMITTER: Giulia Friso  

LAB HEAD: Giulia Friso c/o Klaas van Wijk's Lab

PROVIDER: PXD003684 | Pride | 2019-04-09

REPOSITORIES: Pride

Dataset's files

Source:
Action DRS
F050807.dat-pride.pride.mgf.gz Mgf
F050807.dat-pride.pride.mztab.gz Mztab
F050807.dat-pride.xml.gz Xml
F050808.dat-pride.pride.mgf.gz Mgf
F050808.dat-pride.pride.mztab.gz Mztab
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Publications

The Plastoglobule-Localized Metallopeptidase PGM48 Is a Positive Regulator of Senescence in Arabidopsis thaliana.

Bhuiyan Nazmul H NH   Friso Giulia G   Rowland Elden E   Majsec Kristina K   van Wijk Klaas J KJ  

The Plant cell 20161128 12


Plastoglobuli (PG) are thylakoid-associated monolayer lipid particles with a specific proteome of ∼30 PG core proteins and isoprenoid and neutral lipids. During senescence, PGs increase in size, reflecting their role in dismantling thylakoid membranes. Here, we show that the only PG-localized peptidase PGM48 positively regulates leaf senescence. We discovered that PGM48 is a member of the M48 peptidase family with PGM48 homologs, forming a clade (M48D) only found in photosynthetic organisms. Unl  ...[more]

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