Dataset Information

Tomato clade proteome - Green-fruited Solanum habrochaites lacks fruit-specific carotenogenesis due to metabolic and structural blocks

ABSTRACT: Members of the tomato clade exhibit wide diversity in fruit coloration, growth habit, leaf morphology and mating preferences. However, the mechanisms governing inter-species diversity in fruit coloration are largely unknown. Therefore, a proteomic approach combined with carotenoid profiling and carotenogenic gene expression was used to decipher the diversity in carotenogenesis in green-fruited Solanum habrochaites, orange-fruited S. galapagense, and red-fruited S. pimpinellifolium with S. lycopersicum, cv. Ailsa Craig (tomato).

INSTRUMENT(S): LTQ Orbitrap Velos

ORGANISM(S): Solanum Lycopersicum

TISSUE(S): Plant Cell, Fruit

SUBMITTER: Yellamaraju Sreelakshmi

LAB HEAD: Yellamaraju Sreelakshmi

PROVIDER: PXD003817 | Pride | 2017-10-09

REPOSITORIES: Pride

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Dataset's files

Source:

			Action	DRS
	SG-SL_SG_26dpa_1strepfraction1.msf	Msf
	SG-SL_SG_26dpa_1strepfraction1.raw	Raw
	SG-SL_SG_26dpa_1strepfraction2.msf	Msf
	SG-SL_SG_26dpa_1strepfraction2.raw	Raw
	SG-SL_SG_26dpa_1strepfraction3.msf	Msf

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Publications

Green-fruited Solanum habrochaites lacks fruit-specific carotenogenesis due to metabolic and structural blocks.

Kilambi Himabindu Vasuki HV Manda Kalyani K Rai Avanish A Charakana Chaitanya C Bagri Jayram J Sharma Rameshwar R Sreelakshmi Yellamaraju Y

Journal of experimental botany 20171001 17

Members of the tomato clade exhibit a wide diversity in fruit color, but the mechanisms governing inter-species diversity of coloration are largely unknown. The carotenoid profiles, carotenogenic gene expression and proteome profiles of green-fruited Solanum habrochaites (SH), orange-fruited S. galapagense, and red-fruited S. pimpinellifolium were compared with cultivated tomato [S. lycopersicum cv. Ailsa Craig (SL)] to decipher the molecular basis of coloration diversity. Green-fruited SH, thou ...[more]

PMID: 29048567

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