Proteomics

Dataset Information

0

Human Rheumatoid Arthritis LC-MSMS


ABSTRACT: Malondialdehyde-modified epitopes (MDA-epitopes) can elicit specific autoantibody that expressed oxidative stress arising in rheumatoid arthritis (RA). The purpose of this study was to discover and validate MDA-peptide adducts as novel biomarkers using concanavalin A affinity chromatography, 1D SDS-PAGE, in-gel digestion, and label-free nano-LC-MS, and evaluate levels of serum MDA, MDA-protein adducts, proteins and autoantibody isotypes against an unmodified and MDA-peptide from Taiwanese female patients with RA and healthy controls (HCs). Levels of serum MDA and MDA-protein adducts were significantly higher in RA patients versus HCs. Four differentially expressed novel MDA-peptides were selected that relative modification ratio were 2-fold differences to examine protein levels and assess autoantibodies to MDA-peptides in RA patients compared with HCs. Four of peptides are autoantigens. Furthermore, 4 MDA-peptides can induce more autoantibody isotypes that are statistical significance in RA patients compared to HCs. Serum IgG and IgM against MDA-peptides showed excellent diagnostic performance in discriminating among RA patients and HCs: area under the curve (AUC, 0.96 ~ 0.98), sensitivity (88.9% ~ 97.8%) and specificity (88.9% ~ 100%). Autoantibodies to MDA-epitopes indicate oxidative modifications occurring in RA, and might be useful as clinical markers fro RA diagnosis if further investigated.

INSTRUMENT(S): LTQ Orbitrap

ORGANISM(S): Homo Sapiens (human)

TISSUE(S): Blood Serum

SUBMITTER: Ching-Yu Lin  

LAB HEAD: Ching-Yu Lin

PROVIDER: PXD004546 | Pride | 2021-02-25

REPOSITORIES: Pride

Dataset's files

Source:
Action DRS
F0705-TMU-Lin-RA-ConA-1-1.mgf Mgf
F0705-TMU-Lin-RA-ConA-1-1.pride.mgf.gz Mgf
F0705-TMU-Lin-RA-ConA-1-2.mgf Mgf
F0705-TMU-Lin-RA-ConA-1-2.pride.mgf.gz Mgf
F0705-TMU-Lin-RA-ConA-1-3.mgf Mgf
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Publications

Isotypes of autoantibodies against novel differential 4-hydroxy-2-nonenal-modified peptide adducts in serum is associated with rheumatoid arthritis in Taiwanese women.

Tsai Kai-Leun KL   Chang Che-Chang CC   Chang Yu-Sheng YS   Lu Yi-Ying YY   Tsai I-Jung IJ   Chen Jin-Hua JH   Lin Sheng-Hong SH   Tai Chih-Chun CC   Lin Yi-Fang YF   Chang Hui-Wen HW   Lin Ching-Yu CY   Su Emily Chia-Yu EC  

BMC medical informatics and decision making 20210210 1


<h4>Background</h4>Rheumatoid arthritis (RA) is an autoimmune disorder with systemic inflammation and may be induced by oxidative stress that affects an inflamed joint. Our objectives were to examine isotypes of autoantibodies against 4-hydroxy-2-nonenal (HNE) modifications in RA and associate them with increased levels of autoantibodies in RA patients.<h4>Methods</h4>Serum samples from 155 female patients [60 with RA, 35 with osteoarthritis (OA), and 60 healthy controls (HCs)] were obtained. Fo  ...[more]

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