Proteomics

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Response Profiling Using Shotgun Proteomics Enables Establishing Global Metallodrug Mechanisms of Action - nuclear proteins of arsenic trioxide-treated SW480 epithelial cells


ABSTRACT: Response profiling using shotgun proteomics for establishing global metallodrug mechanisms of action in two colon carcinoma cell lines, HCT116 and SW480, was applied and evaluated with the clinically approved arsenic trioxide. Surprisingly, the complete established mechanism of action of arsenic trioxide was observed by protein regulations in SW480, but not in HCT116 cells. Comparing the basal protein expression in the two cell lines revealed an 80% convergence of protein identifications, but with significant expression differences, which in turn seem affect the extent of protein regulation. For example, while a clear-cut redox response was observed in SW480 cells upon arsenic treatment, such an effect was lacking in HCT116 cells and the latter express drastically higher levels of the involved redox proteins. Response profiling was then used to investigate four anticancer metallodrugs (KP46, KP772, KP1339 and KP1537) by means of functional groups of proteins and mapped their effects according to DNA repair, endocytosis, protection from oxidative stress, protection from endoplasmatic reticulum (ER) stress, cell adhesion and mitochondrial function. We were able to characterize the global effects of these metallodrugs on the proteome and generate hypotheses on hitherto unrecognized mechanisms. Significant differences in the two colon cell lines strongly suggest that knowledge of mechanistic hallmarks of anticancer metallodrug action are imperative for the design of clinical studies and that outcome may be enhanced by means of patient stratification strategies according to these hallmarks.

INSTRUMENT(S): Q Exactive

ORGANISM(S): Homo Sapiens (human)

TISSUE(S): Sw-480 Cell, Colon Epithelial Cell, Colon

DISEASE(S): Colon Cancer

SUBMITTER: Christopher Gerner  

LAB HEAD: Christopher Gerner

PROVIDER: PXD004795 | Pride | 2022-02-24

REPOSITORIES: Pride

Dataset's files

Source:
Action DRS
SW480_ne_As2O3_1a.mgf Mgf
SW480_ne_As2O3_1a.mzid.gz Mzid
SW480_ne_As2O3_1a.pride.mgf.gz Mgf
SW480_ne_As2O3_1a.pride.mztab.gz Mztab
SW480_ne_As2O3_1a.raw Raw
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Publications

Response Profiling Using Shotgun Proteomics Enables Global Metallodrug Mechanisms of Action To Be Established.

Kreutz Dominique D   Bileck Andrea A   Plessl Kerstin K   Wolrab Denise D   Groessl Michael M   Keppler Bernhard K BK   Meier Samuel M SM   Gerner Christopher C  

Chemistry (Weinheim an der Bergstrasse, Germany) 20170110 8


Response profiling using shotgun proteomics for establishing global metallodrug mechanisms of action in two colon carcinoma cell lines, HCT116 and SW480, has been applied and evaluated with the clinically approved arsenic trioxide. Surprisingly, the complete established mechanism of action of arsenic trioxide was observed by protein regulations in SW480, but not HCT116 cells. Comparing the basal protein expression in the two cell lines revealed an 80 % convergence of protein identification, but  ...[more]

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