Proteomics

Dataset Information

0

Analysis of oak stem lesions in Acute Oak Decline using shotgun proteomics


ABSTRACT: Acute Oak Decline (AOD) is a decline-disease currently spreading in Britain, threatening oak trees. Here, we analyze and compare the proteomes of inner bark tissue sampled from oak stems of trees symptomatic with AOD and non-symptomatic trees.

INSTRUMENT(S): Orbitrap Fusion

ORGANISM(S): Quercus Robur Quercus Petraea

TISSUE(S): Plant Cell, Bark

SUBMITTER: Martin Broberg  

LAB HEAD: James McDonald

PROVIDER: PXD004991 | Pride | 2018-02-07

REPOSITORIES: Pride

Dataset's files

Source:
Action DRS
250516_Fraction_1.mzML Mzml
250516_Fraction_2.mzML Mzml
250516_Fraction_3.mzML Mzml
250516_Fraction_4.mzML Mzml
250516_Pooled1-4IncludingPeptideInformation.xlsx Xlsx
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Publications

Integrated multi-omic analysis of host-microbiota interactions in acute oak decline.

Broberg Martin M   Doonan James J   Mundt Filip F   Denman Sandra S   McDonald James E JE  

Microbiome 20180130 1


<h4>Background</h4>Britain's native oak species are currently under threat from acute oak decline (AOD), a decline-disease where stem bleeds overlying necrotic lesions in the inner bark and larval galleries of the bark-boring beetle, Agrilus biguttatus, represent the primary symptoms. It is known that complex interactions between the plant host and its microbiome, i.e. the holobiont, significantly influence the health status of the plant. In AOD, necrotic lesions are caused by a microbiome shift  ...[more]

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