Proteomics

Dataset Information

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Cultured RPE phosphpproteome - Quantitative phosphoproteomics reveals involvement of multiple signaling pathways in early phagocytosis by the retinal pigmented epithelium


ABSTRACT: One of the major biological functions accomplished by the retinal pigmented epithelium (RPE) is the clearance of shed photoreceptor outer segments (POS) through a multistep process referred to as phagocytosis. Phagocytosis helps maintain the viability of photoreceptors which otherwise could succumb to the high metabolic flux and photo-oxidative stress associated with visual processing. Regulatory mechanisms underlying phagocytosis in the RPE are not fully understood, although dysfunction of this process contributes to the pathogenesis of multiple human retinal degenerative disorders, including age-related macular degeneration (AMD). Here we present an integrated analysis of phagocytosing cultured-RPE cells.

INSTRUMENT(S): LTQ Orbitrap Elite

ORGANISM(S): Mus Musculus (mouse)

SUBMITTER: kerwin chiang  

LAB HEAD: Daniel Figeys

PROVIDER: PXD006144 | Pride | 2017-10-27

REPOSITORIES: Pride

Dataset's files

Source:
Action DRS
1014_Brian_RPE_TiO2-enrichment.raw Raw
cultured-RPE_combined.zip Other
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Publications

Quantitative phosphoproteomics reveals involvement of multiple signaling pathways in early phagocytosis by the retinal pigmented epithelium.

Chiang Cheng-Kang CK   Tworak Aleksander A   Kevany Brian M BM   Xu Bo B   Mayne Janice J   Ning Zhibin Z   Figeys Daniel D   Palczewski Krzysztof K  

The Journal of biological chemistry 20171004 48


One of the major biological functions of the retinal pigmented epithelium (RPE) is the clearance of shed photoreceptor outer segments (POS) through a multistep process resembling phagocytosis. RPE phagocytosis helps maintain the viability of photoreceptors that otherwise could succumb to the high metabolic flux and photo-oxidative stress associated with visual processing. The regulatory mechanisms underlying phagocytosis in the RPE are not fully understood, although dysfunction of this process c  ...[more]

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