Proteomics

Dataset Information

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Synaptic GAP and GEF Complexes Cluster Proteins Essential for GTP Signaling


ABSTRACT: GTPase-activating proteins (GAPs) and guanine exchange factors (GEFs) play essential roles in regulating the activity of small GTPases. Several GAPs and GEFs have been shown to be present at the postsynaptic density (PSD) within excitatory glutamatergic neurons and regulate the activity of glutamate receptors. However, it is not known how synaptic GAP and GEF proteins are organized within the PSD signaling machinery, if they have overlapping interaction networks, or if they associate with proteins implicated in contributing to psychiatric disease. Here, we determine the interactomes of three interacting GAP/GEF proteins at the PSD, including the RasGAP Syngap1, the ArfGAP Agap2, and the RhoGEF Kalirin. We describe the functional properties of each interactome and show that these GAP/GEF proteins are highly associated with and cluster other proteins directly involved in GTPase signaling mechanisms. We also utilize Agap2 as an example of GAP/GEFs localized within multiple neuronal compartments and determine additional interactions involving Agap2 outside of the PSD. Functional analysis of PSD and non-PSD interactomes illustrates both common and unique functions of Agap2 determined by its subcellular location.

INSTRUMENT(S): LTQ FT

ORGANISM(S): Mus Musculus (mouse)

TISSUE(S): Brain

SUBMITTER: Brent Wilkinson  

LAB HEAD: Marcelo Coba

PROVIDER: PXD006326 | Pride | 2022-02-22

REPOSITORIES: Pride

Dataset's files

Source:
Action DRS
Agap2-PSD-1.msf Msf
Agap2-PSD-1.raw Raw
Agap2-PSD-2F1.msf Msf
Agap2-PSD-2F1.raw Raw
Agap2-PSD-2F2.msf Msf
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Publications

Synaptic GAP and GEF Complexes Cluster Proteins Essential for GTP Signaling.

Wilkinson Brent B   Li Jing J   Li Jing J   Coba Marcelo P MP  

Scientific reports 20170713 1


GTPase-activating proteins (GAPs) and guanine exchange factors (GEFs) play essential roles in regulating the activity of small GTPases. Several GAPs and GEFs have been shown to be present at the postsynaptic density (PSD) within excitatory glutamatergic neurons and regulate the activity of glutamate receptors. However, it is not known how synaptic GAP and GEF proteins are organized within the PSD signaling machinery, if they have overlapping interaction networks, or if they associate with protei  ...[more]

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