Proteomics

Dataset Information

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SIRT3 Deacetylates TFAM to Promote Mitochondrial Biogenesis


ABSTRACT: SIRT3 is a NAD+-dependent mitochondrial protein deacetylase participating in the regulation of central metabolism and mitochondrial proteostasis. SIRT3 is downregulated in clear cell renal cell carcinoma (ccRCC), a main type of renal cancers, but the function of SIRT3 in tumorigenesis and development of ccRCC remains unknown. In this study, we established a SIRT3 overexpressed cell line to explore the changes of proteomics and metabolomics regulated by SIRT3 expression. Both the results of quantitative proteomics, metabolomics and acetylome showed overexpression of SIRT3 increased mitochondrial biogenesis and reversed the mitochondrial dysfunctions in ccRCC. We found SIRT3 could increase the activity of TFAM through modulation of TFAM transcription, degradation and acetylation level. The acetylation of TFAM K154 decreased while TFAM protein expression increased after SIRT3 overexpression. Further study revealed that SIRT3 could bind with TFAM, and decrease the acetylation of TFAM, promoting TFAM activity in mitochondrial biogenesis. Overall, our results present a new mechanism of SIRT3 in regulating mitochondrial functions, and the downregulation of SIRT3 in ccRCC lowers the activity of TFAM, subsequently inhibits the transcription of mitochondrial genes and mitochondrial biogenesis.

INSTRUMENT(S): Orbitrap Fusion Lumos

ORGANISM(S): Homo Sapiens (human)

TISSUE(S): Permanent Cell Line Cell, Cell Culture

DISEASE(S): Clear Cell Renal Cell Carcinoma

SUBMITTER: Yuling Chen  

LAB HEAD: Huan Liu

PROVIDER: PXD009110 | Pride | 2018-08-14

REPOSITORIES: Pride

Dataset's files

Source:
Action DRS
MS170409_786_Sirt3.pep.xml Pepxml
MS170409_786_Sirt3.prot.xml Xml
MS170409_786_Sirt3_1.raw Raw
MS170409_786_Sirt3_10.raw Raw
MS170409_786_Sirt3_11.raw Raw
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Publications

SIRT3 Overexpression Inhibits Growth of Kidney Tumor Cells and Enhances Mitochondrial Biogenesis.

Liu Huan H   Li Siying S   Liu Xiaohui X   Chen Yuling Y   Deng Haiteng H   Deng Haiteng H  

Journal of proteome research 20180821 9


SIRT3 is a NAD<sup>+</sup>-dependent mitochondrial protein deacetylase implicated in the regulation of central metabolism and mitochondrial proteostasis. SIRT3 is downregulated in clear cell renal cell carcinoma (ccRCC), which is the most common form of renal cancer. Although ccRCC is characterized by a typical Warburg-like phenotype, mitochondrial dysfunction and elevated fat deposition, it is unknown whether SIRT3 plays a role in tumorigenesis and the development of this disease. In the presen  ...[more]

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