Proteomics

Dataset Information

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OLFM4 expression in breast tumor samples


ABSTRACT: Here we describe the first study which used SWATH MS as a tool for robust identification and quantification of breast tissus proteins. By employing a spectral library containing 3200 proteins, we show that this strategy allows the quantification of OLFM4 in each sample together with a deep proteomic coverage which provide a more comprehensive idea of the OLFM4 function in the breast cancer.

INSTRUMENT(S): TripleTOF 5600

ORGANISM(S): Homo Sapiens (human)

DISEASE(S): Breast Cancer

SUBMITTER: Catherine Guette  

LAB HEAD: Catherine Guette

PROVIDER: PXD014194 | Pride | 2019-07-25

REPOSITORIES: Pride

Dataset's files

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Action DRS
DDA-F1.wiff Wiff
DDA-F1.wiff.scan Wiff
DDA-F10.wiff Wiff
DDA-F10.wiff.scan Wiff
DDA-F11.wiff Wiff
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Publications

OLFM4 Expression in Ductal Carcinoma In Situ and in Invasive Breast Cancer Cohorts by a SWATH-Based Proteomic Approach.

Valo Isabelle I   Raro Pedro P   Boissard Alice A   Maarouf Amine A   Jézéquel Pascal P   Verriele Véronique V   Campone Mario M   Coqueret Olivier O   Guette Catherine C  

Proteomics 20190808 21-22


Human olfactomedin-4 (OLFM4) is a secreted protein involved in a variety of cellular functions including proliferation, differentiation, apoptosis, and cell adhesion. OLFM4 expression has been studied in several tumor types including gastric, colorectal, lung, and endometrioid cancers where it has been suggested to be an independent favorable or unfavorable prognostic marker. For breast cancer, the clinical significance of OLFM4 is still unclear. In the present study, SWATH-MS is used as a tool  ...[more]

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