Proteomics

Dataset Information

0

Interrogating the higher order structures of snake venom proteins


ABSTRACT: Snake venoms contain complex mixtures of proteins that play vital roles in the survival of venomous snakes. In line with their diverse pharmacological activities, the protein compositions of snake venoms can be highly variable, and efforts to characterise the primary structures of such proteins are extensive and ongoing. In addition, a significant knowledge gap exists in terms of higher-order interactionsbetweenproteinsproposedto modulate venom potency, which poses a challenge for treatment of envenomation and development of successful therapeutic applications.Here we use a multifaceted mass spectrometrybased approach to characteriseproteinsfrom the medically significant venomsof Collett’s snake Pseudechis collettiand the puff adder Bitis arietans.Following chromatographic fractionation and bottom-up proteomics identification, native mass spectrometry identified, among other components, a 117 kDa non-covalent L-amino acid oxidase dimer in the P. collettivenom and a 60 kDa C-type lectin tetramer in the B. arietansvenom. Furthermore, a 27.7 kDa covalently-linked phospholipase A2(PLA2) dimer was identified in P. collettivenom, and thePLA2species were shownto adopt a highly compact geometry based on ion mobility measurements. Exploration of the catalytic efficiencies of the monomeric and dimeric forms of PLA2revealed that the dimeric PLA2 possessed greater bioactivity than the monomeric PLA2s.This work contributes to ongoing efforts to catalogue the protein components of snake venoms, and notably,itemphasises the importance of understanding higher-order protein interactions in venomsand the utility of a combined mass spectrometric approachfor this task.

INSTRUMENT(S): LTQ Orbitrap, Synapt MS

ORGANISM(S): Vertebrata <metazoa>

TISSUE(S): Venom

SUBMITTER: Parul Mittal  

LAB HEAD: Tara L. Pukala

PROVIDER: PXD016503 | Pride | 2020-02-17

REPOSITORIES: Pride

Dataset's files

Source:
Action DRS
F024977.dat Other
F024978.dat Other
F024979.dat Other
F024983.dat Other
F024984.dat Other
Items per page:
1 - 5 of 12
altmetric image

Publications

Interrogating the higher order structures of snake venom proteins using an integrated mass spectrometric approach.

Wang C Ruth CR   Bubner Emily R ER   Jovcevski Blagojce B   Mittal Parul P   Pukala Tara L TL  

Journal of proteomics 20200203


Snake venoms contain complex mixtures of proteins vital for the survival of venomous snakes. Aligned with their diverse pharmacological activities, the protein compositions of snake venoms are highly variable, and efforts to characterise the primary structures of such proteins are ongoing. Additionally, a significant knowledge gap exists in terms of the higher-order protein structures which modulate venom potency, posing a challenge for successful therapeutic applications. Here we use a multifac  ...[more]

Similar Datasets

2018-12-01 | GSE107584 | GEO
2022-05-20 | PXD027401 | Pride
2019-03-06 | GSE127842 | GEO
2019-03-06 | GSE127841 | GEO
2019-03-06 | GSE127840 | GEO
2023-03-07 | GSE222977 | GEO
2024-03-21 | GSE248215 | GEO
2017-08-23 | GSE72482 | GEO
2022-10-14 | PXD031450 | Pride
2017-08-23 | GSE72175 | GEO