Proteomics

Dataset Information

0

Identification of Novel Lipid Droplet Factors that Regulate Lipophagy and Cholesterol Efflux in Macrophage Foam Cells


ABSTRACT: Macrophage autophagy is a highly anti-atherogenic process that promotes the catabolism of cytosolic lipid droplets (LDs) to maintain cellular lipid homeostasis. Selective autophagy relies on tags such as ubiquitin and a set of selectivity factors including selective autophagy receptors (SARs) to label specific cargo for degradation. Originally described in yeast cells, ‘lipophagy’ refers to the degradation of LDs by autophagy. Yet, how LDs are targeted for autophagy is poorly defined. Here, we employed mass spectrometry to identify lipophagy factors within the macrophage foam cell LD proteome. In addition to structural proteins (e.g. PLIN2), metabolic enzymes (e.g. ACSL) and neutral lipases (e.g. PLPL2), we found the association of proteins related to the ubiquitination machinery (e.g. AUP1) and autophagy (e.g. HMGB, 1433).

INSTRUMENT(S): LTQ Orbitrap Elite

ORGANISM(S): Homo Sapiens (human)

TISSUE(S): Cell Culture, Macrophage

SUBMITTER: Mathieu Lavallée-Adam  

LAB HEAD: Mireille Ouimet

PROVIDER: PXD017511 | Pride | 2022-02-15

REPOSITORIES: Pride

Dataset's files

Source:
Action DRS
20171231_LD_1.pep.xml Pepxml
20171231_LD_1.raw Raw
20171231_LD_1C.pep.xml Pepxml
20171231_LD_1C.raw Raw
20171231_LD_2.pep.xml Pepxml
Items per page:
1 - 5 of 12
altmetric image

Publications

Identification of novel lipid droplet factors that regulate lipophagy and cholesterol efflux in macrophage foam cells.

Robichaud Sabrina S   Fairman Garrett G   Vijithakumar Viyashini V   Mak Esther E   Cook David P DP   Pelletier Alexander R AR   Huard Sylvain S   Vanderhyden Barbara C BC   Figeys Daniel D   Lavallée-Adam Mathieu M   Baetz Kristin K   Ouimet Mireille M  

Autophagy 20210226 11


Macrophage autophagy is a highly anti-atherogenic process that promotes the catabolism of cytosolic lipid droplets (LDs) to maintain cellular lipid homeostasis. Selective autophagy relies on tags such as ubiquitin and a set of selectivity factors including selective autophagy receptors (SARs) to label specific cargo for degradation. Originally described in yeast cells, "lipophagy" refers to the degradation of LDs by autophagy. Yet, how LDs are targeted for autophagy is poorly defined. Here, we e  ...[more]

Similar Datasets

2022-07-12 | PXD010900 | Pride
2022-07-12 | PXD010992 | Pride
2022-10-13 | PXD010948 | Pride
2022-07-12 | PXD010932 | Pride
2015-06-29 | E-GEOD-66809 | biostudies-arrayexpress
2015-06-29 | E-GEOD-66808 | biostudies-arrayexpress
2023-12-31 | PXD048177 | Pride
2018-05-25 | PXD005977 | Pride
| PRJNA506042 | ENA
2020-07-18 | PXD019317 | Pride