Proteomics

Dataset Information

0

The RNF185/Membralin ubiquitin ligase complex is a new ERAD branch involved in the degradation of a distinct subset of integral membrane proteins.


ABSTRACT: The endoplasmic reticulum-associated degradation (ERAD) pathway is responsible for ubiquitin-mediated quality control of secretory and ER-resident proteins. In the present study, two short-lived ER integral membrane model proteins were used to screen a genome-wide CRISPR-Cas9 library, resulting in the identification of a new ERAD branch consisting of the RNF185/Membralin ubiquitin ligase complex. Biochemical and affinity pull-down studies followed by mass spectrometry revealed that the ubiquitin-like domain containing proteins TMUB-1 and -2 are also part of the core complex being specifically enriched by RNF185/Membralin but not by other known ERAD factors like HRD1. Genetic studies showed that the RNF185/Membralin complex control the degradation of endogenous integral membrane proteins, including TMUB2 itself and CYP51A1 from which the initial recombinant model protein was derived.

INSTRUMENT(S): Q Exactive

ORGANISM(S): Homo Sapiens (human)

TISSUE(S): Permanent Cell Line Cell, Cell Culture

SUBMITTER: Pedro Carvalho  

LAB HEAD: Pedro Carvalho

PROVIDER: PXD018517 | Pride | 2020-08-03

REPOSITORIES: pride

altmetric image

Publications


Misfolded proteins in the endoplasmic reticulum (ER) are degraded by ER-associated degradation (ERAD). Although ERAD components involved in degradation of luminal substrates are well characterized, much less is known about quality control of membrane proteins. Here, we analyzed the degradation pathways of two short-lived ER membrane model proteins in mammalian cells. Using a CRISPR-Cas9 genome-wide library screen, we identified an ERAD branch required for quality control of a subset of membrane  ...[more]

Similar Datasets

2017-01-03 | PXD005633 | Pride
2020-04-24 | GSE145895 | GEO
2023-12-17 | GSE231583 | GEO
2013-12-04 | GSE52929 | GEO
2020-05-26 | PXD009375 | Pride
2018-08-17 | GSE118658 | GEO
2013-12-04 | E-GEOD-52929 | biostudies-arrayexpress
| MSV000090333 | MassIVE
2009-02-20 | GSE14003 | GEO
2024-09-11 | PXD047658 | Pride